Gene : Glyma.13G338400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22763//PTHR22763:SF40 - RING ZINC FINGER PROTEIN Genomic Order:  3384
Name:  ? Glyma.13G338400 Secondary Identifier:  ? PAC:30502280
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G338400 0.5kb upstream 0.5kb upstream 2128 true Chr13: 43102330-43104457 Glycine max
Glyma.13G338400 0.5kb upstream 0.5kb upstream 500 false Chr13: 43103958-43104457 Glycine max
Glyma.13G338400 0.5kb downstream 0.5kb downstream 2128 true Chr13: 43101830-43103957 Glycine max
Glyma.13G338400 0.5kb downstream 0.5kb downstream 500 false Chr13: 43101830-43102329 Glycine max
Glyma.13G338400 1.0kb upstream 1.0kb upstream 2628 true Chr13: 43102330-43104957 Glycine max
Glyma.13G338400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43103958-43104957 Glycine max
Glyma.13G338400 1.0kb downstream 1.0kb downstream 2628 true Chr13: 43101330-43103957 Glycine max
Glyma.13G338400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43101330-43102329 Glycine max
Glyma.13G338400 2.0kb upstream 2.0kb upstream 3628 true Chr13: 43102330-43105957 Glycine max
Glyma.13G338400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43103958-43105957 Glycine max
Glyma.13G338400 2.0kb downstream 2.0kb downstream 3628 true Chr13: 43100330-43103957 Glycine max
Glyma.13G338400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43100330-43102329 Glycine max
Glyma.13G338400 5.0kb upstream 5.0kb upstream 6628 true Chr13: 43102330-43108957 Glycine max
Glyma.13G338400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43103958-43108957 Glycine max
Glyma.13G338400 5.0kb downstream 5.0kb downstream 6628 true Chr13: 43097330-43103957 Glycine max
Glyma.13G338400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43097330-43102329 Glycine max
Glyma.13G338400 10.0kb upstream 10.0kb upstream 11628 true Chr13: 43102330-43113957 Glycine max
Glyma.13G338400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43103958-43113957 Glycine max
Glyma.13G338400 10.0kb downstream 10.0kb downstream 11628 true Chr13: 43092330-43103957 Glycine max
Glyma.13G338400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43092330-43102329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296211 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0981 0.0 40.3749   High
cufflinks 4.74158 0.0 13.9747    
cufflinks 4.71511 0.0 13.9901    
cufflinks 0.818467 0.0 2.9529   Low
cufflinks 5.44802 0.0 15.5937    
cufflinks 17.6497 0.0 47.0927   High
cufflinks 0.394244 0.0 1.47541   Low
cufflinks 5.83566 0.0 16.7491    
cufflinks 3.77378 0.0 11.4235    
cufflinks 24.226     High  
cufflinks 52.271     High High
cufflinks 13.297     High  
cufflinks 9.269     High  
cufflinks 3.772       Low
cufflinks 33.244     High  
cufflinks 7.424     High  
cufflinks 146.308     High High
cufflinks 8.37     High  
cufflinks 4.07       Low
cufflinks 4.949        
cufflinks 42.321     High  
cufflinks 6.318        
cufflinks 4.704        
cufflinks 43.32     High  
cufflinks 3.214       Low
cufflinks 56.863     High High

0 Strain