Gene : Glyma.13G339600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31390:SF4 - GB Genomic Order:  3396
Name:  ? Glyma.13G339600 Secondary Identifier:  ? PAC:30505049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G339600 0.5kb upstream 0.5kb upstream 5661 true Chr13: 43166598-43172258 Glycine max
Glyma.13G339600 0.5kb upstream 0.5kb upstream 500 false Chr13: 43166598-43167097 Glycine max
Glyma.13G339600 0.5kb downstream 0.5kb downstream 5661 true Chr13: 43167098-43172758 Glycine max
Glyma.13G339600 0.5kb downstream 0.5kb downstream 500 false Chr13: 43172259-43172758 Glycine max
Glyma.13G339600 1.0kb upstream 1.0kb upstream 6161 true Chr13: 43166098-43172258 Glycine max
Glyma.13G339600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43166098-43167097 Glycine max
Glyma.13G339600 1.0kb downstream 1.0kb downstream 6161 true Chr13: 43167098-43173258 Glycine max
Glyma.13G339600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43172259-43173258 Glycine max
Glyma.13G339600 2.0kb upstream 2.0kb upstream 7161 true Chr13: 43165098-43172258 Glycine max
Glyma.13G339600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43165098-43167097 Glycine max
Glyma.13G339600 2.0kb downstream 2.0kb downstream 7161 true Chr13: 43167098-43174258 Glycine max
Glyma.13G339600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43172259-43174258 Glycine max
Glyma.13G339600 5.0kb upstream 5.0kb upstream 10161 true Chr13: 43162098-43172258 Glycine max
Glyma.13G339600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43162098-43167097 Glycine max
Glyma.13G339600 5.0kb downstream 5.0kb downstream 10161 true Chr13: 43167098-43177258 Glycine max
Glyma.13G339600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43172259-43177258 Glycine max
Glyma.13G339600 10.0kb upstream 10.0kb upstream 15161 true Chr13: 43157098-43172258 Glycine max
Glyma.13G339600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43157098-43167097 Glycine max
Glyma.13G339600 10.0kb downstream 10.0kb downstream 15161 true Chr13: 43167098-43182258 Glycine max
Glyma.13G339600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43172259-43182258 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306180 5265 Fabidae View MSA
124066548 5270 Rosid View MSA
123746890 5271 Pentapetalae View MSA
122788317 5272 Eudicot View MSA
122041699 5273 Angiosperm View MSA
121309882 5274 Embryophyte View MSA
123347520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.238373 0.0 1.4765   Low
cufflinks 3.36066 0.0 14.0458    
cufflinks 1.49446 0.0 5.93269    
cufflinks 2.86954 0.0 11.0427    
cufflinks 2.83614 0.0 11.1467    
cufflinks 12.7854 0.0 49.9082   High
cufflinks 1.24527 0.0 6.25662    
cufflinks 3.11856 0.0 11.8125    
cufflinks 3.2611 0.0 13.7023    
cufflinks 0.418        
cufflinks 0.073       Low
cufflinks 0.768        
cufflinks 1.101       High
cufflinks 0.742        
cufflinks 0.096       Low
cufflinks 0.643        
cufflinks 0.186        
cufflinks 0.603        
cufflinks 1.125       High
cufflinks 0.514        
cufflinks 0.12       Low
cufflinks 0.741        
cufflinks 0.911        
cufflinks 0.071       Low
cufflinks 0.54        
cufflinks 0.22        

0 Strain