Gene : Glyma.13G339800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  3398
Name:  ? Glyma.13G339800 Secondary Identifier:  ? PAC:30500383
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G339800 0.5kb upstream 0.5kb upstream 5968 true Chr13: 43177315-43183282 Glycine max
Glyma.13G339800 0.5kb upstream 0.5kb upstream 500 false Chr13: 43182783-43183282 Glycine max
Glyma.13G339800 0.5kb downstream 0.5kb downstream 5968 true Chr13: 43176815-43182782 Glycine max
Glyma.13G339800 0.5kb downstream 0.5kb downstream 500 false Chr13: 43176815-43177314 Glycine max
Glyma.13G339800 1.0kb upstream 1.0kb upstream 6468 true Chr13: 43177315-43183782 Glycine max
Glyma.13G339800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43182783-43183782 Glycine max
Glyma.13G339800 1.0kb downstream 1.0kb downstream 6468 true Chr13: 43176315-43182782 Glycine max
Glyma.13G339800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43176315-43177314 Glycine max
Glyma.13G339800 2.0kb upstream 2.0kb upstream 7468 true Chr13: 43177315-43184782 Glycine max
Glyma.13G339800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43182783-43184782 Glycine max
Glyma.13G339800 2.0kb downstream 2.0kb downstream 7468 true Chr13: 43175315-43182782 Glycine max
Glyma.13G339800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43175315-43177314 Glycine max
Glyma.13G339800 5.0kb upstream 5.0kb upstream 10468 true Chr13: 43177315-43187782 Glycine max
Glyma.13G339800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43182783-43187782 Glycine max
Glyma.13G339800 5.0kb downstream 5.0kb downstream 10468 true Chr13: 43172315-43182782 Glycine max
Glyma.13G339800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43172315-43177314 Glycine max
Glyma.13G339800 10.0kb upstream 10.0kb upstream 15468 true Chr13: 43177315-43192782 Glycine max
Glyma.13G339800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43182783-43192782 Glycine max
Glyma.13G339800 10.0kb downstream 10.0kb downstream 15468 true Chr13: 43167315-43182782 Glycine max
Glyma.13G339800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43167315-43177314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308762 5265 Fabidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.0863 0.0 258.199 High High
cufflinks 4.08208 0.0 18.342    
cufflinks 32.2313 0.0 139.376 High High
cufflinks 7.77529 0.0 30.9005    
cufflinks 3.76006 0.0 15.5744    
cufflinks 0.856671 0.0 5.61033   Low
cufflinks 2.1567 0.0 10.759    
cufflinks 17.3475 0.0 66.8784    
cufflinks 10.9272 0.0 41.6782    
cufflinks 0.836        
cufflinks 2.151        
cufflinks 3.666       High
cufflinks 0.607        
cufflinks 0.458       Low
cufflinks 3.533       High
cufflinks 0.613        
cufflinks 1.293        
cufflinks 1.56        
cufflinks 0.71        
cufflinks 0.339       Low
cufflinks 3.709       High
cufflinks 0.569        
cufflinks 0.952        
cufflinks 2.872       High
cufflinks 0.574        
cufflinks 1.375        

0 Strain