Gene : Glyma.13G340200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  3402
Name:  ? Glyma.13G340200 Secondary Identifier:  ? PAC:30504167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G340200 0.5kb upstream 0.5kb upstream 6115 true Chr13: 43217675-43223789 Glycine max
Glyma.13G340200 0.5kb upstream 0.5kb upstream 500 false Chr13: 43223290-43223789 Glycine max
Glyma.13G340200 0.5kb downstream 0.5kb downstream 6115 true Chr13: 43217175-43223289 Glycine max
Glyma.13G340200 0.5kb downstream 0.5kb downstream 500 false Chr13: 43217175-43217674 Glycine max
Glyma.13G340200 1.0kb upstream 1.0kb upstream 6615 true Chr13: 43217675-43224289 Glycine max
Glyma.13G340200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43223290-43224289 Glycine max
Glyma.13G340200 1.0kb downstream 1.0kb downstream 6615 true Chr13: 43216675-43223289 Glycine max
Glyma.13G340200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43216675-43217674 Glycine max
Glyma.13G340200 2.0kb upstream 2.0kb upstream 7615 true Chr13: 43217675-43225289 Glycine max
Glyma.13G340200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43223290-43225289 Glycine max
Glyma.13G340200 2.0kb downstream 2.0kb downstream 7615 true Chr13: 43215675-43223289 Glycine max
Glyma.13G340200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43215675-43217674 Glycine max
Glyma.13G340200 5.0kb upstream 5.0kb upstream 10615 true Chr13: 43217675-43228289 Glycine max
Glyma.13G340200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43223290-43228289 Glycine max
Glyma.13G340200 5.0kb downstream 5.0kb downstream 10615 true Chr13: 43212675-43223289 Glycine max
Glyma.13G340200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43212675-43217674 Glycine max
Glyma.13G340200 10.0kb upstream 10.0kb upstream 15615 true Chr13: 43217675-43233289 Glycine max
Glyma.13G340200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43223290-43233289 Glycine max
Glyma.13G340200 10.0kb downstream 10.0kb downstream 15615 true Chr13: 43207675-43223289 Glycine max
Glyma.13G340200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43207675-43217674 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299663 5265 Fabidae View MSA
124067099 5270 Rosid View MSA
123736996 5271 Pentapetalae View MSA
122788045 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8681 0.0 51.9769    
cufflinks 8.72222 0.0 60.5246    
cufflinks 11.1478 0.0 48.2162    
cufflinks 13.1489 0.0 71.0031    
cufflinks 12.1468 0.0 89.5907    
cufflinks 6.42101 0.0 40.2069   Low
cufflinks 12.8426 0.0 70.5558    
cufflinks 12.7588 0.0 77.9785    
cufflinks 10.4479 0.0 76.3751    
cufflinks 0.672        
cufflinks 1.111       High
cufflinks 0.629        
cufflinks 0.604        
cufflinks 0.797        
cufflinks 0.743        
cufflinks 0.832        
cufflinks 0.304       Low
cufflinks 0.643        
cufflinks 0.838        
cufflinks 0.991        
cufflinks 0.977        
cufflinks 0.981        
cufflinks 0.87        
cufflinks 1.119       High
cufflinks 0.88        
cufflinks 0.629        

0 Strain