Gene : Glyma.13G340300 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.17.1.4 - Xanthine dehydrogenase / Xanthine/NAD(+) oxidoreductase Genomic Order:  3403
Name:  ? Glyma.13G340300 Secondary Identifier:  ? PAC:30504026
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5695 Glycine max pathologic  
Gmax PWY-6596 Glycine max pathologic  
Gmax PWY-6606 Glycine max pathologic  
Gmax PWY-6608 Glycine max pathologic  
Gmax SALVADEHYPOX-PWY Glycine max pathologic  
Gmax URSIN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G340300 0.5kb upstream 0.5kb upstream 11751 true Chr13: 43228466-43240216 Glycine max
Glyma.13G340300 0.5kb upstream 0.5kb upstream 500 false Chr13: 43228466-43228965 Glycine max
Glyma.13G340300 0.5kb downstream 0.5kb downstream 11751 true Chr13: 43228966-43240716 Glycine max
Glyma.13G340300 0.5kb downstream 0.5kb downstream 500 false Chr13: 43240217-43240716 Glycine max
Glyma.13G340300 1.0kb upstream 1.0kb upstream 12251 true Chr13: 43227966-43240216 Glycine max
Glyma.13G340300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43227966-43228965 Glycine max
Glyma.13G340300 1.0kb downstream 1.0kb downstream 12251 true Chr13: 43228966-43241216 Glycine max
Glyma.13G340300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43240217-43241216 Glycine max
Glyma.13G340300 2.0kb upstream 2.0kb upstream 13251 true Chr13: 43226966-43240216 Glycine max
Glyma.13G340300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43226966-43228965 Glycine max
Glyma.13G340300 2.0kb downstream 2.0kb downstream 13251 true Chr13: 43228966-43242216 Glycine max
Glyma.13G340300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43240217-43242216 Glycine max
Glyma.13G340300 5.0kb upstream 5.0kb upstream 16251 true Chr13: 43223966-43240216 Glycine max
Glyma.13G340300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43223966-43228965 Glycine max
Glyma.13G340300 5.0kb downstream 5.0kb downstream 16251 true Chr13: 43228966-43245216 Glycine max
Glyma.13G340300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43240217-43245216 Glycine max
Glyma.13G340300 10.0kb upstream 10.0kb upstream 21251 true Chr13: 43218966-43240216 Glycine max
Glyma.13G340300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43218966-43228965 Glycine max
Glyma.13G340300 10.0kb downstream 10.0kb downstream 21251 true Chr13: 43228966-43250216 Glycine max
Glyma.13G340300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43240217-43250216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309009 5265 Fabidae View MSA
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6722 0.0 34.5307    
cufflinks 6.79986 0.0 18.1413    
cufflinks 32.4549 0.0 99.8255 High High
cufflinks 8.31782 0.0 22.2486    
cufflinks 24.1997 0.0 70.485 High  
cufflinks 21.5534 0.0 61.9862    
cufflinks 8.76398 0.0 23.4551    
cufflinks 5.14725 0.0 13.7822   Low
cufflinks 39.7429 0.0 125.686 High High
cufflinks 3.534       Low
cufflinks 105.068     High High
cufflinks 12.642     High  
cufflinks 10.411     High  
cufflinks 9.042     High  
cufflinks 236.679     High High
cufflinks 9.242     High  
cufflinks 8.231     High  
cufflinks 7.532     High  
cufflinks 4.972        
cufflinks 11.627     High  
cufflinks 66.032     High High
cufflinks 7.543     High  
cufflinks 3.522       Low
cufflinks 73.332     High High
cufflinks 10.884     High  
cufflinks 28.826     High  

0 Strain