Gene : Glyma.13G342300 G. max Wm82.a2.v1
Genomic Order:  3423 Name:  ? Glyma.13G342300
Secondary Identifier:  ? PAC:30501630
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G342300 0.5kb upstream 0.5kb upstream 2503 true Chr13: 43378817-43381319 Glycine max
Glyma.13G342300 0.5kb upstream 0.5kb upstream 500 false Chr13: 43378817-43379316 Glycine max
Glyma.13G342300 0.5kb downstream 0.5kb downstream 2503 true Chr13: 43379317-43381819 Glycine max
Glyma.13G342300 0.5kb downstream 0.5kb downstream 500 false Chr13: 43381320-43381819 Glycine max
Glyma.13G342300 1.0kb upstream 1.0kb upstream 3003 true Chr13: 43378317-43381319 Glycine max
Glyma.13G342300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43378317-43379316 Glycine max
Glyma.13G342300 1.0kb downstream 1.0kb downstream 3003 true Chr13: 43379317-43382319 Glycine max
Glyma.13G342300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43381320-43382319 Glycine max
Glyma.13G342300 2.0kb upstream 2.0kb upstream 4003 true Chr13: 43377317-43381319 Glycine max
Glyma.13G342300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43377317-43379316 Glycine max
Glyma.13G342300 2.0kb downstream 2.0kb downstream 4003 true Chr13: 43379317-43383319 Glycine max
Glyma.13G342300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43381320-43383319 Glycine max
Glyma.13G342300 5.0kb upstream 5.0kb upstream 7003 true Chr13: 43374317-43381319 Glycine max
Glyma.13G342300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43374317-43379316 Glycine max
Glyma.13G342300 5.0kb downstream 5.0kb downstream 7003 true Chr13: 43379317-43386319 Glycine max
Glyma.13G342300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43381320-43386319 Glycine max
Glyma.13G342300 10.0kb upstream 10.0kb upstream 12003 true Chr13: 43369317-43381319 Glycine max
Glyma.13G342300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43369317-43379316 Glycine max
Glyma.13G342300 10.0kb downstream 10.0kb downstream 12003 true Chr13: 43379317-43391319 Glycine max
Glyma.13G342300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43381320-43391319 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240797 5265 Fabidae Singleton cluster - no MSA
124067611 5270 Rosid View MSA
123751802 5271 Pentapetalae View MSA
122793081 5272 Eudicot View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.97282 0.0 19.3216    
cufflinks 8.5732 0.0 23.3734    
cufflinks 1.65252 0.0 5.49459   Low
cufflinks 6.7521 0.0 18.7267    
cufflinks 2.97944 0.0 9.16564    
cufflinks 0.741579 0.0 2.66511   Low
cufflinks 21.8304 0.0 58.4653 High High
cufflinks 5.63228 0.0 15.8688    
cufflinks 6.86038 0.0 19.0256    
cufflinks 5.137        
cufflinks 0.227       Low
cufflinks 4.447        
cufflinks 3.873        
cufflinks 3.621        
cufflinks 1.215        
cufflinks 21.3     High  
cufflinks 0.499       Low
cufflinks 14.981     High  
cufflinks 6.9        
cufflinks 43.324     High High
cufflinks 0.439       Low
cufflinks 31.144     High High
cufflinks 17.312     High  
cufflinks 0.359       Low
cufflinks 26.806     High High
cufflinks 0.347       Low

0 Strain