Gene : Misin02G076500 M. sinensis v7.1

Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  765
Name:  ? Misin02G076500 Secondary Identifier:  ? PAC:40474117

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Msinensis GLYSYN-PWY Miscanthus sinensis pathologic  
Msinensis PWY-2161 Miscanthus sinensis pathologic  
Msinensis PWY-3841 Miscanthus sinensis pathologic  
Msinensis SER-GLYSYN-PWY Miscanthus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Misin02G076500 0.5kb upstream 0.5kb upstream 13043 true Chr02: 12952198-12965240 Miscanthus sinensis
Misin02G076500 0.5kb upstream 0.5kb upstream 500 false Chr02: 12964741-12965240 Miscanthus sinensis
Misin02G076500 0.5kb downstream 0.5kb downstream 13043 true Chr02: 12951698-12964740 Miscanthus sinensis
Misin02G076500 0.5kb downstream 0.5kb downstream 500 false Chr02: 12951698-12952197 Miscanthus sinensis
Misin02G076500 1.0kb upstream 1.0kb upstream 13543 true Chr02: 12952198-12965740 Miscanthus sinensis
Misin02G076500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12964741-12965740 Miscanthus sinensis
Misin02G076500 1.0kb downstream 1.0kb downstream 13543 true Chr02: 12951198-12964740 Miscanthus sinensis
Misin02G076500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12951198-12952197 Miscanthus sinensis
Misin02G076500 2.0kb upstream 2.0kb upstream 14543 true Chr02: 12952198-12966740 Miscanthus sinensis
Misin02G076500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12964741-12966740 Miscanthus sinensis
Misin02G076500 2.0kb downstream 2.0kb downstream 14543 true Chr02: 12950198-12964740 Miscanthus sinensis
Misin02G076500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12950198-12952197 Miscanthus sinensis
Misin02G076500 5.0kb upstream 5.0kb upstream 17543 true Chr02: 12952198-12969740 Miscanthus sinensis
Misin02G076500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12964741-12969740 Miscanthus sinensis
Misin02G076500 5.0kb downstream 5.0kb downstream 17543 true Chr02: 12947198-12964740 Miscanthus sinensis
Misin02G076500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12947198-12952197 Miscanthus sinensis
Misin02G076500 10.0kb upstream 10.0kb upstream 22543 true Chr02: 12952198-12974740 Miscanthus sinensis
Misin02G076500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12964741-12974740 Miscanthus sinensis
Misin02G076500 10.0kb downstream 10.0kb downstream 22543 true Chr02: 12942198-12964740 Miscanthus sinensis
Misin02G076500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12942198-12952197 Miscanthus sinensis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187926 5267 Panicoideae View MSA
124570013 5269 Grass View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain