Gene : Glyma.13G332700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11620//PTHR11620:SF14 - 60S RIBOSOMAL PROTEIN L23A Genomic Order:  3327
Name:  ? Glyma.13G332700 Secondary Identifier:  ? PAC:30505638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G332700 0.5kb upstream 0.5kb upstream 2106 true Chr13: 42687282-42689387 Glycine max
Glyma.13G332700 0.5kb upstream 0.5kb upstream 500 false Chr13: 42687282-42687781 Glycine max
Glyma.13G332700 0.5kb downstream 0.5kb downstream 2106 true Chr13: 42687782-42689887 Glycine max
Glyma.13G332700 0.5kb downstream 0.5kb downstream 500 false Chr13: 42689388-42689887 Glycine max
Glyma.13G332700 1.0kb upstream 1.0kb upstream 2606 true Chr13: 42686782-42689387 Glycine max
Glyma.13G332700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42686782-42687781 Glycine max
Glyma.13G332700 1.0kb downstream 1.0kb downstream 2606 true Chr13: 42687782-42690387 Glycine max
Glyma.13G332700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42689388-42690387 Glycine max
Glyma.13G332700 2.0kb upstream 2.0kb upstream 3606 true Chr13: 42685782-42689387 Glycine max
Glyma.13G332700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42685782-42687781 Glycine max
Glyma.13G332700 2.0kb downstream 2.0kb downstream 3606 true Chr13: 42687782-42691387 Glycine max
Glyma.13G332700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42689388-42691387 Glycine max
Glyma.13G332700 5.0kb upstream 5.0kb upstream 6606 true Chr13: 42682782-42689387 Glycine max
Glyma.13G332700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42682782-42687781 Glycine max
Glyma.13G332700 5.0kb downstream 5.0kb downstream 6606 true Chr13: 42687782-42694387 Glycine max
Glyma.13G332700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42689388-42694387 Glycine max
Glyma.13G332700 10.0kb upstream 10.0kb upstream 11606 true Chr13: 42677782-42689387 Glycine max
Glyma.13G332700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42677782-42687781 Glycine max
Glyma.13G332700 10.0kb downstream 10.0kb downstream 11606 true Chr13: 42687782-42699387 Glycine max
Glyma.13G332700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42689388-42699387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.4813 0.0 177.746 High  
cufflinks 84.3199 0.0 309.233 High  
cufflinks 26.6754 0.0 90.134 High Low
cufflinks 54.8039 0.0 189.819 High  
cufflinks 113.635 0.0 383.655 High High
cufflinks 77.0662 0.0 278.572 High  
cufflinks 110.866 0.0 367.537 High High
cufflinks 71.0411 0.0 255.918 High  
cufflinks 76.5145 0.0 275.212 High  
cufflinks 16.507     High  
cufflinks 4.941       Low
cufflinks 13.279     High  
cufflinks 43.677     High High
cufflinks 59.258     High High
cufflinks 7.073     High Low
cufflinks 17.497     High  
cufflinks 10.906     High  
cufflinks 15.32     High  
cufflinks 24.285     High  
cufflinks 11.07     High  
cufflinks 8.39     High  
cufflinks 12.096     High  
cufflinks 23.637     High  
cufflinks 5.823       Low
cufflinks 14.225     High  
cufflinks 11.664     High  

0 Strain