Gene : Glyma.13G332900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33431:SF2 - GB Genomic Order:  3329
Name:  ? Glyma.13G332900 Secondary Identifier:  ? PAC:30504385
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G332900 0.5kb upstream 0.5kb upstream 2757 true Chr13: 42692099-42694855 Glycine max
Glyma.13G332900 0.5kb upstream 0.5kb upstream 500 false Chr13: 42694356-42694855 Glycine max
Glyma.13G332900 0.5kb downstream 0.5kb downstream 2757 true Chr13: 42691599-42694355 Glycine max
Glyma.13G332900 0.5kb downstream 0.5kb downstream 500 false Chr13: 42691599-42692098 Glycine max
Glyma.13G332900 1.0kb upstream 1.0kb upstream 3257 true Chr13: 42692099-42695355 Glycine max
Glyma.13G332900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42694356-42695355 Glycine max
Glyma.13G332900 1.0kb downstream 1.0kb downstream 3257 true Chr13: 42691099-42694355 Glycine max
Glyma.13G332900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42691099-42692098 Glycine max
Glyma.13G332900 2.0kb upstream 2.0kb upstream 4257 true Chr13: 42692099-42696355 Glycine max
Glyma.13G332900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42694356-42696355 Glycine max
Glyma.13G332900 2.0kb downstream 2.0kb downstream 4257 true Chr13: 42690099-42694355 Glycine max
Glyma.13G332900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42690099-42692098 Glycine max
Glyma.13G332900 5.0kb upstream 5.0kb upstream 7257 true Chr13: 42692099-42699355 Glycine max
Glyma.13G332900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42694356-42699355 Glycine max
Glyma.13G332900 5.0kb downstream 5.0kb downstream 7257 true Chr13: 42687099-42694355 Glycine max
Glyma.13G332900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42687099-42692098 Glycine max
Glyma.13G332900 10.0kb upstream 10.0kb upstream 12257 true Chr13: 42692099-42704355 Glycine max
Glyma.13G332900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42694356-42704355 Glycine max
Glyma.13G332900 10.0kb downstream 10.0kb downstream 12257 true Chr13: 42682099-42694355 Glycine max
Glyma.13G332900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42682099-42692098 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297007 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.831742 0.0 3.07257    
cufflinks 0.215584 0.0 0.845202 Low  
cufflinks 1.34143 0.0 4.81739   High
cufflinks 0.391847 0.0 1.49777    
cufflinks 0.477396 0.0 1.8095    
cufflinks 0.151296 0.0 0.600876 Low  
cufflinks 0.0176424 0.0 0.0808058 Low Low
cufflinks 0.853128 0.0 3.14115    
cufflinks 0.259199 0.0 1.0086 Low  
cufflinks 0.073     Low  
cufflinks 0.057       Low
cufflinks 0.489       High
cufflinks 0.059     Low  
cufflinks 0.032     Low Low
cufflinks 0.05     Low Low
cufflinks 0.128        
cufflinks 0.114        
cufflinks 0.288       High
cufflinks 0.291       High
cufflinks 0.173        
cufflinks 0.076        
cufflinks 0.303       High
cufflinks 0.193        
cufflinks 0.086        
cufflinks 0.104        
cufflinks 0.401       High

0 Strain