Gene : Glyma.13G332800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  3328
Name:  ? Glyma.13G332800 Secondary Identifier:  ? PAC:30505041
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G332800 0.5kb upstream 0.5kb upstream 1046 true Chr13: 42690771-42691816 Glycine max
Glyma.13G332800 0.5kb upstream 0.5kb upstream 500 false Chr13: 42691317-42691816 Glycine max
Glyma.13G332800 0.5kb downstream 0.5kb downstream 1046 true Chr13: 42690271-42691316 Glycine max
Glyma.13G332800 0.5kb downstream 0.5kb downstream 500 false Chr13: 42690271-42690770 Glycine max
Glyma.13G332800 1.0kb upstream 1.0kb upstream 1546 true Chr13: 42690771-42692316 Glycine max
Glyma.13G332800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42691317-42692316 Glycine max
Glyma.13G332800 1.0kb downstream 1.0kb downstream 1546 true Chr13: 42689771-42691316 Glycine max
Glyma.13G332800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42689771-42690770 Glycine max
Glyma.13G332800 2.0kb upstream 2.0kb upstream 2546 true Chr13: 42690771-42693316 Glycine max
Glyma.13G332800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42691317-42693316 Glycine max
Glyma.13G332800 2.0kb downstream 2.0kb downstream 2546 true Chr13: 42688771-42691316 Glycine max
Glyma.13G332800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42688771-42690770 Glycine max
Glyma.13G332800 5.0kb upstream 5.0kb upstream 5546 true Chr13: 42690771-42696316 Glycine max
Glyma.13G332800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42691317-42696316 Glycine max
Glyma.13G332800 5.0kb downstream 5.0kb downstream 5546 true Chr13: 42685771-42691316 Glycine max
Glyma.13G332800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42685771-42690770 Glycine max
Glyma.13G332800 10.0kb upstream 10.0kb upstream 10546 true Chr13: 42690771-42701316 Glycine max
Glyma.13G332800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42691317-42701316 Glycine max
Glyma.13G332800 10.0kb downstream 10.0kb downstream 10546 true Chr13: 42680771-42691316 Glycine max
Glyma.13G332800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42680771-42690770 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304407 5265 Fabidae View MSA
124074542 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056411 0.0 0.25512 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0548324 0.0 0.248169 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.029     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain