Gene : Glyma.13G333900 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1756 - Histone 2A Genomic Order:  3339
Name:  ? Glyma.13G333900 Secondary Identifier:  ? PAC:30504847
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G333900 0.5kb upstream 0.5kb upstream 1572 true Chr13: 42777733-42779304 Glycine max
Glyma.13G333900 0.5kb upstream 0.5kb upstream 500 false Chr13: 42778805-42779304 Glycine max
Glyma.13G333900 0.5kb downstream 0.5kb downstream 1572 true Chr13: 42777233-42778804 Glycine max
Glyma.13G333900 0.5kb downstream 0.5kb downstream 500 false Chr13: 42777233-42777732 Glycine max
Glyma.13G333900 1.0kb upstream 1.0kb upstream 2072 true Chr13: 42777733-42779804 Glycine max
Glyma.13G333900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42778805-42779804 Glycine max
Glyma.13G333900 1.0kb downstream 1.0kb downstream 2072 true Chr13: 42776733-42778804 Glycine max
Glyma.13G333900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42776733-42777732 Glycine max
Glyma.13G333900 2.0kb upstream 2.0kb upstream 3072 true Chr13: 42777733-42780804 Glycine max
Glyma.13G333900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42778805-42780804 Glycine max
Glyma.13G333900 2.0kb downstream 2.0kb downstream 3072 true Chr13: 42775733-42778804 Glycine max
Glyma.13G333900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42775733-42777732 Glycine max
Glyma.13G333900 5.0kb upstream 5.0kb upstream 6072 true Chr13: 42777733-42783804 Glycine max
Glyma.13G333900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42778805-42783804 Glycine max
Glyma.13G333900 5.0kb downstream 5.0kb downstream 6072 true Chr13: 42772733-42778804 Glycine max
Glyma.13G333900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42772733-42777732 Glycine max
Glyma.13G333900 10.0kb upstream 10.0kb upstream 11072 true Chr13: 42777733-42788804 Glycine max
Glyma.13G333900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42778805-42788804 Glycine max
Glyma.13G333900 10.0kb downstream 10.0kb downstream 11072 true Chr13: 42767733-42778804 Glycine max
Glyma.13G333900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42767733-42777732 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312228 5265 Fabidae View MSA
124071077 5270 Rosid View MSA
123750361 5271 Pentapetalae View MSA
122788374 5272 Eudicot View MSA
122048599 5273 Angiosperm View MSA
121351397 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.22974 0.0 22.1452   Low
cufflinks 106.273 0.0 299.14 High High
cufflinks 31.2826 0.0 83.6777 High  
cufflinks 18.1457 0.0 49.8506    
cufflinks 42.2507 0.0 112.798 High  
cufflinks 41.2416 0.0 110.05 High  
cufflinks 23.9031 0.0 64.5021 High  
cufflinks 16.7327 0.0 46.2448    
cufflinks 45.1941 0.0 120.76 High  
cufflinks 26.473     High  
cufflinks 12.878     High  
cufflinks 23.402     High  
cufflinks 38.789     High  
cufflinks 44.166     High  
cufflinks 6.877     High Low
cufflinks 72.868     High High
cufflinks 12.833     High  
cufflinks 13.995     High  
cufflinks 64.617     High  
cufflinks 47.824     High  
cufflinks 14.976     High  
cufflinks 62.795     High  
cufflinks 164.278     High High
cufflinks 7.898     High Low
cufflinks 56.169     High  
cufflinks 18.984     High  

0 Strain