Gene : Glyma.13G335000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12687:SF4 - NUCLEOLAR COMPLEX PROTEIN 2 HOMOLOG Genomic Order:  3350
Name:  ? Glyma.13G335000 Secondary Identifier:  ? PAC:30505611
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G335000 0.5kb upstream 0.5kb upstream 5171 true Chr13: 42851863-42857033 Glycine max
Glyma.13G335000 0.5kb upstream 0.5kb upstream 500 false Chr13: 42856534-42857033 Glycine max
Glyma.13G335000 0.5kb downstream 0.5kb downstream 5171 true Chr13: 42851363-42856533 Glycine max
Glyma.13G335000 0.5kb downstream 0.5kb downstream 500 false Chr13: 42851363-42851862 Glycine max
Glyma.13G335000 1.0kb upstream 1.0kb upstream 5671 true Chr13: 42851863-42857533 Glycine max
Glyma.13G335000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42856534-42857533 Glycine max
Glyma.13G335000 1.0kb downstream 1.0kb downstream 5671 true Chr13: 42850863-42856533 Glycine max
Glyma.13G335000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42850863-42851862 Glycine max
Glyma.13G335000 2.0kb upstream 2.0kb upstream 6671 true Chr13: 42851863-42858533 Glycine max
Glyma.13G335000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42856534-42858533 Glycine max
Glyma.13G335000 2.0kb downstream 2.0kb downstream 6671 true Chr13: 42849863-42856533 Glycine max
Glyma.13G335000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42849863-42851862 Glycine max
Glyma.13G335000 5.0kb upstream 5.0kb upstream 9671 true Chr13: 42851863-42861533 Glycine max
Glyma.13G335000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42856534-42861533 Glycine max
Glyma.13G335000 5.0kb downstream 5.0kb downstream 9671 true Chr13: 42846863-42856533 Glycine max
Glyma.13G335000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42846863-42851862 Glycine max
Glyma.13G335000 10.0kb upstream 10.0kb upstream 14671 true Chr13: 42851863-42866533 Glycine max
Glyma.13G335000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42856534-42866533 Glycine max
Glyma.13G335000 10.0kb downstream 10.0kb downstream 14671 true Chr13: 42841863-42856533 Glycine max
Glyma.13G335000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42841863-42851862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306379 5265 Fabidae View MSA
124068634 5270 Rosid View MSA
123737675 5271 Pentapetalae View MSA
122797934 5272 Eudicot View MSA
122046727 5273 Angiosperm View MSA
121344476 5274 Embryophyte View MSA
123425551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85574 0.0 26.6242   High
cufflinks 7.45812 0.0 20.4901    
cufflinks 3.39023 0.0 10.1129   Low
cufflinks 5.19106 0.0 14.7349    
cufflinks 8.28262 0.0 22.6092    
cufflinks 3.89227 0.0 11.4666   Low
cufflinks 9.38788 0.0 25.4378   High
cufflinks 5.15354 0.0 14.6504    
cufflinks 6.8868 0.0 19.0409    
cufflinks 3.139        
cufflinks 2.77       Low
cufflinks 3.234        
cufflinks 6.438       High
cufflinks 8.11     High High
cufflinks 3.952        
cufflinks 5.028        
cufflinks 2.329       Low
cufflinks 3.125        
cufflinks 4.811        
cufflinks 6.919     High High
cufflinks 5.254        
cufflinks 6.191        
cufflinks 4.468        
cufflinks 3.664        
cufflinks 5.97        
cufflinks 3.994        

0 Strain