Gene : Glyma.13G335300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  3353
Name:  ? Glyma.13G335300 Secondary Identifier:  ? PAC:30500700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G335300 0.5kb upstream 0.5kb upstream 3807 true Chr13: 42882227-42886033 Glycine max
Glyma.13G335300 0.5kb upstream 0.5kb upstream 500 false Chr13: 42882227-42882726 Glycine max
Glyma.13G335300 0.5kb downstream 0.5kb downstream 3807 true Chr13: 42882727-42886533 Glycine max
Glyma.13G335300 0.5kb downstream 0.5kb downstream 500 false Chr13: 42886034-42886533 Glycine max
Glyma.13G335300 1.0kb upstream 1.0kb upstream 4307 true Chr13: 42881727-42886033 Glycine max
Glyma.13G335300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42881727-42882726 Glycine max
Glyma.13G335300 1.0kb downstream 1.0kb downstream 4307 true Chr13: 42882727-42887033 Glycine max
Glyma.13G335300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42886034-42887033 Glycine max
Glyma.13G335300 2.0kb upstream 2.0kb upstream 5307 true Chr13: 42880727-42886033 Glycine max
Glyma.13G335300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42880727-42882726 Glycine max
Glyma.13G335300 2.0kb downstream 2.0kb downstream 5307 true Chr13: 42882727-42888033 Glycine max
Glyma.13G335300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42886034-42888033 Glycine max
Glyma.13G335300 5.0kb upstream 5.0kb upstream 8307 true Chr13: 42877727-42886033 Glycine max
Glyma.13G335300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42877727-42882726 Glycine max
Glyma.13G335300 5.0kb downstream 5.0kb downstream 8307 true Chr13: 42882727-42891033 Glycine max
Glyma.13G335300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42886034-42891033 Glycine max
Glyma.13G335300 10.0kb upstream 10.0kb upstream 13307 true Chr13: 42872727-42886033 Glycine max
Glyma.13G335300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42872727-42882726 Glycine max
Glyma.13G335300 10.0kb downstream 10.0kb downstream 13307 true Chr13: 42882727-42896033 Glycine max
Glyma.13G335300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42886034-42896033 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310561 5265 Fabidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.14167 0.0 32.1323    
cufflinks 11.6627 0.0 40.4388    
cufflinks 4.98662 0.0 19.7278   Low
cufflinks 16.1719 0.0 55.9478    
cufflinks 10.282 0.0 35.8954    
cufflinks 10.7783 0.0 37.3176    
cufflinks 10.3417 0.0 31.2263    
cufflinks 26.3627 0.0 94.1346 High High
cufflinks 6.04953 0.0 19.7061   Low
cufflinks 6.68       High
cufflinks 0.47       Low
cufflinks 2.732        
cufflinks 3.747        
cufflinks 3.768        
cufflinks 0.404       Low
cufflinks 3.612        
cufflinks 1.036        
cufflinks 4.582        
cufflinks 3.373        
cufflinks 4.285        
cufflinks 0.583       Low
cufflinks 3.82        
cufflinks 3.15        
cufflinks 0.459       Low
cufflinks 3.682        
cufflinks 0.706       Low

0 Strain