Gene : Glyma.13G325000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12136:SF41 - PLECKSTRIN HOMOLOGY (PH) AND LIPID-BINDING START DOMAIN-CONTAINING PROTEIN Genomic Order:  3250
Name:  ? Glyma.13G325000 Secondary Identifier:  ? PAC:30501144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G325000 0.5kb upstream 0.5kb upstream 8251 true Chr13: 42007859-42016109 Glycine max
Glyma.13G325000 0.5kb upstream 0.5kb upstream 500 false Chr13: 42007859-42008358 Glycine max
Glyma.13G325000 0.5kb downstream 0.5kb downstream 8251 true Chr13: 42008359-42016609 Glycine max
Glyma.13G325000 0.5kb downstream 0.5kb downstream 500 false Chr13: 42016110-42016609 Glycine max
Glyma.13G325000 1.0kb upstream 1.0kb upstream 8751 true Chr13: 42007359-42016109 Glycine max
Glyma.13G325000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42007359-42008358 Glycine max
Glyma.13G325000 1.0kb downstream 1.0kb downstream 8751 true Chr13: 42008359-42017109 Glycine max
Glyma.13G325000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42016110-42017109 Glycine max
Glyma.13G325000 2.0kb upstream 2.0kb upstream 9751 true Chr13: 42006359-42016109 Glycine max
Glyma.13G325000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42006359-42008358 Glycine max
Glyma.13G325000 2.0kb downstream 2.0kb downstream 9751 true Chr13: 42008359-42018109 Glycine max
Glyma.13G325000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42016110-42018109 Glycine max
Glyma.13G325000 5.0kb upstream 5.0kb upstream 12751 true Chr13: 42003359-42016109 Glycine max
Glyma.13G325000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42003359-42008358 Glycine max
Glyma.13G325000 5.0kb downstream 5.0kb downstream 12751 true Chr13: 42008359-42021109 Glycine max
Glyma.13G325000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42016110-42021109 Glycine max
Glyma.13G325000 10.0kb upstream 10.0kb upstream 17751 true Chr13: 41998359-42016109 Glycine max
Glyma.13G325000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41998359-42008358 Glycine max
Glyma.13G325000 10.0kb downstream 10.0kb downstream 17751 true Chr13: 42008359-42026109 Glycine max
Glyma.13G325000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42016110-42026109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307511 5265 Fabidae View MSA
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79771 0.0 13.249    
cufflinks 4.05965 0.0 13.6641    
cufflinks 35.5383 0.0 131.831 High High
cufflinks 4.9142 0.0 16.9448    
cufflinks 8.79704 0.0 30.3839    
cufflinks 3.72356 0.0 12.7536    
cufflinks 3.9932 0.0 13.8621    
cufflinks 5.43847 0.0 17.3429    
cufflinks 14.4688 0.0 51.5228    
cufflinks 1.348        
cufflinks 0.725        
cufflinks 3.259       High
cufflinks 1.122        
cufflinks 0.9        
cufflinks 20.602     High High
cufflinks 0.84        
cufflinks 0.453        
cufflinks 1.187        
cufflinks 1.299        
cufflinks 0.827        
cufflinks 0.763        
cufflinks 0.747        
cufflinks 0.514        
cufflinks 0.655        
cufflinks 0.847        
cufflinks 0.626        

0 Strain