Gene : Glyma.13G325700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13027 - SAND PROTEIN-RELATED Genomic Order:  3257
Name:  ? Glyma.13G325700 Secondary Identifier:  ? PAC:30504214
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G325700 0.5kb upstream 0.5kb upstream 6069 true Chr13: 42090699-42096767 Glycine max
Glyma.13G325700 0.5kb upstream 0.5kb upstream 500 false Chr13: 42096268-42096767 Glycine max
Glyma.13G325700 0.5kb downstream 0.5kb downstream 6069 true Chr13: 42090199-42096267 Glycine max
Glyma.13G325700 0.5kb downstream 0.5kb downstream 500 false Chr13: 42090199-42090698 Glycine max
Glyma.13G325700 1.0kb upstream 1.0kb upstream 6569 true Chr13: 42090699-42097267 Glycine max
Glyma.13G325700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42096268-42097267 Glycine max
Glyma.13G325700 1.0kb downstream 1.0kb downstream 6569 true Chr13: 42089699-42096267 Glycine max
Glyma.13G325700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42089699-42090698 Glycine max
Glyma.13G325700 2.0kb upstream 2.0kb upstream 7569 true Chr13: 42090699-42098267 Glycine max
Glyma.13G325700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42096268-42098267 Glycine max
Glyma.13G325700 2.0kb downstream 2.0kb downstream 7569 true Chr13: 42088699-42096267 Glycine max
Glyma.13G325700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42088699-42090698 Glycine max
Glyma.13G325700 5.0kb upstream 5.0kb upstream 10569 true Chr13: 42090699-42101267 Glycine max
Glyma.13G325700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42096268-42101267 Glycine max
Glyma.13G325700 5.0kb downstream 5.0kb downstream 10569 true Chr13: 42085699-42096267 Glycine max
Glyma.13G325700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42085699-42090698 Glycine max
Glyma.13G325700 10.0kb upstream 10.0kb upstream 15569 true Chr13: 42090699-42106267 Glycine max
Glyma.13G325700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42096268-42106267 Glycine max
Glyma.13G325700 10.0kb downstream 10.0kb downstream 15569 true Chr13: 42080699-42096267 Glycine max
Glyma.13G325700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42080699-42090698 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310936 5265 Fabidae View MSA
124066322 5270 Rosid View MSA
123753489 5271 Pentapetalae View MSA
122789295 5272 Eudicot View MSA
122043673 5273 Angiosperm View MSA
121344284 5274 Embryophyte View MSA
123428228 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82383 0.0 21.0775   Low
cufflinks 7.10328 0.0 24.8476    
cufflinks 6.69655 0.0 23.4832    
cufflinks 7.03818 0.0 24.5788    
cufflinks 8.66232 0.0 29.6119   High
cufflinks 5.71098 0.0 20.6509   Low
cufflinks 7.59223 0.0 26.3804    
cufflinks 6.22947 0.0 22.2179    
cufflinks 5.9574 0.0 21.3516    
cufflinks 1.652        
cufflinks 0.822       Low
cufflinks 1.455        
cufflinks 2.191       High
cufflinks 2.415       High
cufflinks 0.898       Low
cufflinks 1.968        
cufflinks 0.756       Low
cufflinks 1.659        
cufflinks 2.193       High
cufflinks 2.174        
cufflinks 0.9       Low
cufflinks 1.994        
cufflinks 1.634        
cufflinks 0.892       Low
cufflinks 2.001        
cufflinks 0.965        

0 Strain