Gene : Glyma.13G327100 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  3271
Name:  ? Glyma.13G327100 Secondary Identifier:  ? PAC:30504118
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G327100 0.5kb upstream 0.5kb upstream 1914 true Chr13: 42202683-42204596 Glycine max
Glyma.13G327100 0.5kb upstream 0.5kb upstream 500 false Chr13: 42202683-42203182 Glycine max
Glyma.13G327100 0.5kb downstream 0.5kb downstream 1914 true Chr13: 42203183-42205096 Glycine max
Glyma.13G327100 0.5kb downstream 0.5kb downstream 500 false Chr13: 42204597-42205096 Glycine max
Glyma.13G327100 1.0kb upstream 1.0kb upstream 2414 true Chr13: 42202183-42204596 Glycine max
Glyma.13G327100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42202183-42203182 Glycine max
Glyma.13G327100 1.0kb downstream 1.0kb downstream 2414 true Chr13: 42203183-42205596 Glycine max
Glyma.13G327100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42204597-42205596 Glycine max
Glyma.13G327100 2.0kb upstream 2.0kb upstream 3414 true Chr13: 42201183-42204596 Glycine max
Glyma.13G327100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42201183-42203182 Glycine max
Glyma.13G327100 2.0kb downstream 2.0kb downstream 3414 true Chr13: 42203183-42206596 Glycine max
Glyma.13G327100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42204597-42206596 Glycine max
Glyma.13G327100 5.0kb upstream 5.0kb upstream 6414 true Chr13: 42198183-42204596 Glycine max
Glyma.13G327100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42198183-42203182 Glycine max
Glyma.13G327100 5.0kb downstream 5.0kb downstream 6414 true Chr13: 42203183-42209596 Glycine max
Glyma.13G327100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42204597-42209596 Glycine max
Glyma.13G327100 10.0kb upstream 10.0kb upstream 11414 true Chr13: 42193183-42204596 Glycine max
Glyma.13G327100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42193183-42203182 Glycine max
Glyma.13G327100 10.0kb downstream 10.0kb downstream 11414 true Chr13: 42203183-42214596 Glycine max
Glyma.13G327100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42204597-42214596 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2482 0.0 51.7028    
cufflinks 49.8244 0.0 135.489 High  
cufflinks 2.83686 0.0 9.4172    
cufflinks 7.67551 0.0 22.1977    
cufflinks 8.70462 0.0 24.8445    
cufflinks 7.7305 0.0 22.3589    
cufflinks 0.148458 0.0 0.58843 Low Low
cufflinks 90.329 0.0 261.6 High High
cufflinks 7.56865 0.0 21.9043    
cufflinks 177.887     High High
cufflinks 0.592       Low
cufflinks 2.694        
cufflinks 4.283        
cufflinks 2.797        
cufflinks 0.107       Low
cufflinks 4.391        
cufflinks 8.554     High  
cufflinks 5.052        
cufflinks 47.107     High High
cufflinks 1.879        
cufflinks 2.435        
cufflinks 3.332        
cufflinks 2.804        
cufflinks 0.997        
cufflinks 2.771        
cufflinks 1.719        

0 Strain