Gene : Glyma.13G327700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  3277
Name:  ? Glyma.13G327700 Secondary Identifier:  ? PAC:30504617
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G327700 0.5kb upstream 0.5kb upstream 3355 true Chr13: 42229990-42233344 Glycine max
Glyma.13G327700 0.5kb upstream 0.5kb upstream 500 false Chr13: 42232845-42233344 Glycine max
Glyma.13G327700 0.5kb downstream 0.5kb downstream 3355 true Chr13: 42229490-42232844 Glycine max
Glyma.13G327700 0.5kb downstream 0.5kb downstream 500 false Chr13: 42229490-42229989 Glycine max
Glyma.13G327700 1.0kb upstream 1.0kb upstream 3855 true Chr13: 42229990-42233844 Glycine max
Glyma.13G327700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42232845-42233844 Glycine max
Glyma.13G327700 1.0kb downstream 1.0kb downstream 3855 true Chr13: 42228990-42232844 Glycine max
Glyma.13G327700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42228990-42229989 Glycine max
Glyma.13G327700 2.0kb upstream 2.0kb upstream 4855 true Chr13: 42229990-42234844 Glycine max
Glyma.13G327700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42232845-42234844 Glycine max
Glyma.13G327700 2.0kb downstream 2.0kb downstream 4855 true Chr13: 42227990-42232844 Glycine max
Glyma.13G327700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42227990-42229989 Glycine max
Glyma.13G327700 5.0kb upstream 5.0kb upstream 7855 true Chr13: 42229990-42237844 Glycine max
Glyma.13G327700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42232845-42237844 Glycine max
Glyma.13G327700 5.0kb downstream 5.0kb downstream 7855 true Chr13: 42224990-42232844 Glycine max
Glyma.13G327700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42224990-42229989 Glycine max
Glyma.13G327700 10.0kb upstream 10.0kb upstream 12855 true Chr13: 42229990-42242844 Glycine max
Glyma.13G327700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42232845-42242844 Glycine max
Glyma.13G327700 10.0kb downstream 10.0kb downstream 12855 true Chr13: 42219990-42232844 Glycine max
Glyma.13G327700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42219990-42229989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782986 5273 Angiosperm View MSA
122300520 5265 Fabidae View MSA
124070118 5270 Rosid View MSA
123754224 5271 Pentapetalae View MSA
122775615 5272 Eudicot View MSA
121054482 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0188457 0.0 0.0852299 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0116356 0.0 0.055051 Low Low
cufflinks 0.0509895 0.0 0.212393 Low  
cufflinks 0.0159466 0.0 0.0732614 Low  
cufflinks 0.0353087 0.0 0.151316 Low  
cufflinks 0.0166699 0.0 0.0763516 Low  
cufflinks 0.0367667 0.0 0.15678 Low  
cufflinks 0.0748436 0.0 0.304915 Low High
cufflinks 0.025     Low  
cufflinks 2.342       High
cufflinks 0.033     Low  
cufflinks 0.011     Low  
cufflinks 0.025     Low  
cufflinks 10.03     High High
cufflinks 0.019     Low  
cufflinks 0.017     Low  
cufflinks 0.108     Low  
cufflinks 0.024     Low  
cufflinks 0.018     Low  
cufflinks 4.906       High
cufflinks 0.005     Low Low
cufflinks 0.013     Low  
cufflinks 1.399       High
cufflinks 0.01     Low  
cufflinks 0.679        

0 Strain