Gene : Glyma.13G328400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  3284
Name:  ? Glyma.13G328400 Secondary Identifier:  ? PAC:30503106
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G328400 0.5kb upstream 0.5kb upstream 2676 true Chr13: 42303841-42306516 Glycine max
Glyma.13G328400 0.5kb upstream 0.5kb upstream 500 false Chr13: 42306017-42306516 Glycine max
Glyma.13G328400 0.5kb downstream 0.5kb downstream 2676 true Chr13: 42303341-42306016 Glycine max
Glyma.13G328400 0.5kb downstream 0.5kb downstream 500 false Chr13: 42303341-42303840 Glycine max
Glyma.13G328400 1.0kb upstream 1.0kb upstream 3176 true Chr13: 42303841-42307016 Glycine max
Glyma.13G328400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42306017-42307016 Glycine max
Glyma.13G328400 1.0kb downstream 1.0kb downstream 3176 true Chr13: 42302841-42306016 Glycine max
Glyma.13G328400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42302841-42303840 Glycine max
Glyma.13G328400 2.0kb upstream 2.0kb upstream 4176 true Chr13: 42303841-42308016 Glycine max
Glyma.13G328400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42306017-42308016 Glycine max
Glyma.13G328400 2.0kb downstream 2.0kb downstream 4176 true Chr13: 42301841-42306016 Glycine max
Glyma.13G328400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42301841-42303840 Glycine max
Glyma.13G328400 5.0kb upstream 5.0kb upstream 7176 true Chr13: 42303841-42311016 Glycine max
Glyma.13G328400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42306017-42311016 Glycine max
Glyma.13G328400 5.0kb downstream 5.0kb downstream 7176 true Chr13: 42298841-42306016 Glycine max
Glyma.13G328400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42298841-42303840 Glycine max
Glyma.13G328400 10.0kb upstream 10.0kb upstream 12176 true Chr13: 42303841-42316016 Glycine max
Glyma.13G328400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42306017-42316016 Glycine max
Glyma.13G328400 10.0kb downstream 10.0kb downstream 12176 true Chr13: 42293841-42306016 Glycine max
Glyma.13G328400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42293841-42303840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313919 5265 Fabidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00758927 0.0 0.0359067 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0485035 0.0 0.197605 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.216     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 81.985     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain