Gene : Glyma.13G328500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31301:SF14 - LOB DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  3285
Name:  ? Glyma.13G328500 Secondary Identifier:  ? PAC:30504732
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G328500 0.5kb upstream 0.5kb upstream 2694 true Chr13: 42316419-42319112 Glycine max
Glyma.13G328500 0.5kb upstream 0.5kb upstream 500 false Chr13: 42318613-42319112 Glycine max
Glyma.13G328500 0.5kb downstream 0.5kb downstream 2694 true Chr13: 42315919-42318612 Glycine max
Glyma.13G328500 0.5kb downstream 0.5kb downstream 500 false Chr13: 42315919-42316418 Glycine max
Glyma.13G328500 1.0kb upstream 1.0kb upstream 3194 true Chr13: 42316419-42319612 Glycine max
Glyma.13G328500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42318613-42319612 Glycine max
Glyma.13G328500 1.0kb downstream 1.0kb downstream 3194 true Chr13: 42315419-42318612 Glycine max
Glyma.13G328500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42315419-42316418 Glycine max
Glyma.13G328500 2.0kb upstream 2.0kb upstream 4194 true Chr13: 42316419-42320612 Glycine max
Glyma.13G328500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42318613-42320612 Glycine max
Glyma.13G328500 2.0kb downstream 2.0kb downstream 4194 true Chr13: 42314419-42318612 Glycine max
Glyma.13G328500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42314419-42316418 Glycine max
Glyma.13G328500 5.0kb upstream 5.0kb upstream 7194 true Chr13: 42316419-42323612 Glycine max
Glyma.13G328500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42318613-42323612 Glycine max
Glyma.13G328500 5.0kb downstream 5.0kb downstream 7194 true Chr13: 42311419-42318612 Glycine max
Glyma.13G328500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42311419-42316418 Glycine max
Glyma.13G328500 10.0kb upstream 10.0kb upstream 12194 true Chr13: 42316419-42328612 Glycine max
Glyma.13G328500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42318613-42328612 Glycine max
Glyma.13G328500 10.0kb downstream 10.0kb downstream 12194 true Chr13: 42306419-42318612 Glycine max
Glyma.13G328500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42306419-42316418 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301117 5265 Fabidae View MSA
124072229 5270 Rosid View MSA
123742665 5271 Pentapetalae View MSA
122789908 5272 Eudicot View MSA
122042687 5273 Angiosperm View MSA
121310001 5274 Embryophyte View MSA
123347609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74985 0.0 6.2096    
cufflinks 0.537176 0.0 2.03412   Low
cufflinks 3.81882 0.0 12.4443    
cufflinks 11.2836 0.0 31.7911   High
cufflinks 1.55572 0.0 5.56596    
cufflinks 2.38166 0.0 8.23324    
cufflinks 1.42347 0.0 5.11978    
cufflinks 3.95435 0.0 12.7824    
cufflinks 2.33578 0.0 8.0766    
cufflinks 0.681        
cufflinks 0.572        
cufflinks 1.533       High
cufflinks 1.68       High
cufflinks 0.776        
cufflinks 0.127       Low
cufflinks 0.217        
cufflinks 0.413        
cufflinks 0.921        
cufflinks 0.639        
cufflinks 0.171       Low
cufflinks 1.966       High
cufflinks 0.296        
cufflinks 0.728        
cufflinks 1.066        
cufflinks 0.046     Low Low
cufflinks 1.092        

0 Strain