Gene : Glyma.13G322400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  3224
Name:  ? Glyma.13G322400 Secondary Identifier:  ? PAC:30505981
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G322400 0.5kb upstream 0.5kb upstream 2909 true Chr13: 41687448-41690356 Glycine max
Glyma.13G322400 0.5kb upstream 0.5kb upstream 500 false Chr13: 41687448-41687947 Glycine max
Glyma.13G322400 0.5kb downstream 0.5kb downstream 2909 true Chr13: 41687948-41690856 Glycine max
Glyma.13G322400 0.5kb downstream 0.5kb downstream 500 false Chr13: 41690357-41690856 Glycine max
Glyma.13G322400 1.0kb upstream 1.0kb upstream 3409 true Chr13: 41686948-41690356 Glycine max
Glyma.13G322400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41686948-41687947 Glycine max
Glyma.13G322400 1.0kb downstream 1.0kb downstream 3409 true Chr13: 41687948-41691356 Glycine max
Glyma.13G322400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41690357-41691356 Glycine max
Glyma.13G322400 2.0kb upstream 2.0kb upstream 4409 true Chr13: 41685948-41690356 Glycine max
Glyma.13G322400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41685948-41687947 Glycine max
Glyma.13G322400 2.0kb downstream 2.0kb downstream 4409 true Chr13: 41687948-41692356 Glycine max
Glyma.13G322400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41690357-41692356 Glycine max
Glyma.13G322400 5.0kb upstream 5.0kb upstream 7409 true Chr13: 41682948-41690356 Glycine max
Glyma.13G322400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41682948-41687947 Glycine max
Glyma.13G322400 5.0kb downstream 5.0kb downstream 7409 true Chr13: 41687948-41695356 Glycine max
Glyma.13G322400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41690357-41695356 Glycine max
Glyma.13G322400 10.0kb upstream 10.0kb upstream 12409 true Chr13: 41677948-41690356 Glycine max
Glyma.13G322400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41677948-41687947 Glycine max
Glyma.13G322400 10.0kb downstream 10.0kb downstream 12409 true Chr13: 41687948-41700356 Glycine max
Glyma.13G322400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41690357-41700356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314600 5265 Fabidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.010274 0.0 0.0464642 Low Low
cufflinks 0.704991 0.0 2.52886    
cufflinks 0.0753262 0.0 0.299881 Low  
cufflinks 0.37668 0.0 1.40087    
cufflinks 2.28138 0.0 7.16347   High
cufflinks 0.892486 0.0 3.13776    
cufflinks 0.0538222 0.0 0.216606 Low  
cufflinks 0.114142 0.0 0.447144 Low  
cufflinks 0.412443 0.0 1.52566    
cufflinks 1.794        
cufflinks 0.016     Low Low
cufflinks 0.363        
cufflinks 2.922       High
cufflinks 3.803       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.754        
cufflinks 0.048     Low Low
cufflinks 1.912        
cufflinks 0.473        
cufflinks 1.764        
cufflinks 0.109        
cufflinks 1.27        
cufflinks 0.394        
cufflinks 0.007     Low Low
cufflinks 1.015        
cufflinks 0.278        

0 Strain