Gene : Glyma.13G323000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24096:SF236 - PROTEIN ACS-9 Genomic Order:  3230
Name:  ? Glyma.13G323000 Secondary Identifier:  ? PAC:30502954
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY1F-FLAVSYN Glycine max pathologic  
Gmax PWY-361 Glycine max pathologic  
Gmax PWY-6435 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G323000 0.5kb upstream 0.5kb upstream 5966 true Chr13: 41740300-41746265 Glycine max
Glyma.13G323000 0.5kb upstream 0.5kb upstream 500 false Chr13: 41740300-41740799 Glycine max
Glyma.13G323000 0.5kb downstream 0.5kb downstream 5966 true Chr13: 41740800-41746765 Glycine max
Glyma.13G323000 0.5kb downstream 0.5kb downstream 500 false Chr13: 41746266-41746765 Glycine max
Glyma.13G323000 1.0kb upstream 1.0kb upstream 6466 true Chr13: 41739800-41746265 Glycine max
Glyma.13G323000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41739800-41740799 Glycine max
Glyma.13G323000 1.0kb downstream 1.0kb downstream 6466 true Chr13: 41740800-41747265 Glycine max
Glyma.13G323000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41746266-41747265 Glycine max
Glyma.13G323000 2.0kb upstream 2.0kb upstream 7466 true Chr13: 41738800-41746265 Glycine max
Glyma.13G323000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41738800-41740799 Glycine max
Glyma.13G323000 2.0kb downstream 2.0kb downstream 7466 true Chr13: 41740800-41748265 Glycine max
Glyma.13G323000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41746266-41748265 Glycine max
Glyma.13G323000 5.0kb upstream 5.0kb upstream 10466 true Chr13: 41735800-41746265 Glycine max
Glyma.13G323000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41735800-41740799 Glycine max
Glyma.13G323000 5.0kb downstream 5.0kb downstream 10466 true Chr13: 41740800-41751265 Glycine max
Glyma.13G323000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41746266-41751265 Glycine max
Glyma.13G323000 10.0kb upstream 10.0kb upstream 15466 true Chr13: 41730800-41746265 Glycine max
Glyma.13G323000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41730800-41740799 Glycine max
Glyma.13G323000 10.0kb downstream 10.0kb downstream 15466 true Chr13: 41740800-41756265 Glycine max
Glyma.13G323000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41746266-41756265 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314766 5265 Fabidae View MSA
124066794 5270 Rosid View MSA
123740977 5271 Pentapetalae View MSA
122792811 5272 Eudicot View MSA
122045114 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7705 0.0 41.1579    
cufflinks 14.2596 0.0 42.4386    
cufflinks 11.1732 0.0 39.8072    
cufflinks 10.8269 0.0 32.8341    
cufflinks 13.0032 0.0 38.958    
cufflinks 16.9032 0.0 50.0916    
cufflinks 21.3382 0.0 64.0955   High
cufflinks 7.30299 0.0 23.4068   Low
cufflinks 10.7882 0.0 32.746    
cufflinks 1.103        
cufflinks 0.469       Low
cufflinks 1.96        
cufflinks 2.556        
cufflinks 1.751        
cufflinks 0.162       Low
cufflinks 1.52        
cufflinks 2.958       High
cufflinks 1.773        
cufflinks 3.755       High
cufflinks 1.719        
cufflinks 0.708        
cufflinks 2.361        
cufflinks 1.865        
cufflinks 0.853        
cufflinks 1.438        
cufflinks 1.551        

0 Strain