Gene : Glyma.13G360700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  3607
Name:  ? Glyma.13G360700 Secondary Identifier:  ? PAC:30503673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G360700 0.5kb upstream 0.5kb upstream 5438 true Chr13: 44773333-44778770 Glycine max
Glyma.13G360700 0.5kb upstream 0.5kb upstream 500 false Chr13: 44778271-44778770 Glycine max
Glyma.13G360700 0.5kb downstream 0.5kb downstream 5438 true Chr13: 44772833-44778270 Glycine max
Glyma.13G360700 0.5kb downstream 0.5kb downstream 500 false Chr13: 44772833-44773332 Glycine max
Glyma.13G360700 1.0kb upstream 1.0kb upstream 5938 true Chr13: 44773333-44779270 Glycine max
Glyma.13G360700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44778271-44779270 Glycine max
Glyma.13G360700 1.0kb downstream 1.0kb downstream 5938 true Chr13: 44772333-44778270 Glycine max
Glyma.13G360700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44772333-44773332 Glycine max
Glyma.13G360700 2.0kb upstream 2.0kb upstream 6938 true Chr13: 44773333-44780270 Glycine max
Glyma.13G360700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44778271-44780270 Glycine max
Glyma.13G360700 2.0kb downstream 2.0kb downstream 6938 true Chr13: 44771333-44778270 Glycine max
Glyma.13G360700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44771333-44773332 Glycine max
Glyma.13G360700 5.0kb upstream 5.0kb upstream 9938 true Chr13: 44773333-44783270 Glycine max
Glyma.13G360700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44778271-44783270 Glycine max
Glyma.13G360700 5.0kb downstream 5.0kb downstream 9938 true Chr13: 44768333-44778270 Glycine max
Glyma.13G360700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44768333-44773332 Glycine max
Glyma.13G360700 10.0kb upstream 10.0kb upstream 14938 true Chr13: 44773333-44788270 Glycine max
Glyma.13G360700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44778271-44788270 Glycine max
Glyma.13G360700 10.0kb downstream 10.0kb downstream 14938 true Chr13: 44763333-44778270 Glycine max
Glyma.13G360700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44763333-44773332 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312102 5265 Fabidae View MSA
124069711 5270 Rosid View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07025 0.0 5.14584   Low
cufflinks 12.0696 0.0 41.538   High
cufflinks 3.03657 0.0 10.5405    
cufflinks 4.04411 0.0 15.5084    
cufflinks 6.17792 0.0 18.8699    
cufflinks 3.53849 0.0 13.7323    
cufflinks 6.09024 0.0 21.5314    
cufflinks 4.02027 0.0 15.2613    
cufflinks 5.42494 0.0 16.7936    
cufflinks 1.953        
cufflinks 0.862       Low
cufflinks 2.029        
cufflinks 3.465        
cufflinks 4.173        
cufflinks 1.209        
cufflinks 4.34        
cufflinks 0.69       Low
cufflinks 1.72        
cufflinks 6.455       High
cufflinks 3.223        
cufflinks 1.329        
cufflinks 3.878        
cufflinks 5.386       High
cufflinks 1.207        
cufflinks 3.216        
cufflinks 1.354        

0 Strain