Gene : Glyma.13G363400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10410:SF2 - LYS-63-SPECIFIC DEUBIQUITINASE BRCC36 Genomic Order:  3634
Name:  ? Glyma.13G363400 Secondary Identifier:  ? PAC:30501464
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G363400 0.5kb upstream 0.5kb upstream 5759 true Chr13: 45017473-45023231 Glycine max
Glyma.13G363400 0.5kb upstream 0.5kb upstream 500 false Chr13: 45017473-45017972 Glycine max
Glyma.13G363400 0.5kb downstream 0.5kb downstream 5759 true Chr13: 45017973-45023731 Glycine max
Glyma.13G363400 0.5kb downstream 0.5kb downstream 500 false Chr13: 45023232-45023731 Glycine max
Glyma.13G363400 1.0kb upstream 1.0kb upstream 6259 true Chr13: 45016973-45023231 Glycine max
Glyma.13G363400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45016973-45017972 Glycine max
Glyma.13G363400 1.0kb downstream 1.0kb downstream 6259 true Chr13: 45017973-45024231 Glycine max
Glyma.13G363400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45023232-45024231 Glycine max
Glyma.13G363400 2.0kb upstream 2.0kb upstream 7259 true Chr13: 45015973-45023231 Glycine max
Glyma.13G363400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45015973-45017972 Glycine max
Glyma.13G363400 2.0kb downstream 2.0kb downstream 7259 true Chr13: 45017973-45025231 Glycine max
Glyma.13G363400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45023232-45025231 Glycine max
Glyma.13G363400 5.0kb upstream 5.0kb upstream 10259 true Chr13: 45012973-45023231 Glycine max
Glyma.13G363400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45012973-45017972 Glycine max
Glyma.13G363400 5.0kb downstream 5.0kb downstream 10259 true Chr13: 45017973-45028231 Glycine max
Glyma.13G363400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45023232-45028231 Glycine max
Glyma.13G363400 10.0kb upstream 10.0kb upstream 15259 true Chr13: 45007973-45023231 Glycine max
Glyma.13G363400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45007973-45017972 Glycine max
Glyma.13G363400 10.0kb downstream 10.0kb downstream 15259 true Chr13: 45017973-45033231 Glycine max
Glyma.13G363400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45023232-45033231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306931 5265 Fabidae View MSA
124064840 5270 Rosid View MSA
123741552 5271 Pentapetalae View MSA
122788768 5272 Eudicot View MSA
122043403 5273 Angiosperm View MSA
121344026 5274 Embryophyte View MSA
123428720 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.73322 0.0 8.54258   Low
cufflinks 6.69439 0.0 24.9652    
cufflinks 3.51939 0.0 13.1069    
cufflinks 7.8953 0.0 29.7199    
cufflinks 5.28774 0.0 20.6716    
cufflinks 3.6137 0.0 13.488    
cufflinks 15.4229 0.0 52.9689   High
cufflinks 6.93504 0.0 25.5377    
cufflinks 5.24608 0.0 21.0223    
cufflinks 1.131        
cufflinks 0.394       Low
cufflinks 1.291        
cufflinks 1.342        
cufflinks 1.734       High
cufflinks 0.602       Low
cufflinks 1.27        
cufflinks 0.688        
cufflinks 1.395        
cufflinks 1.692       High
cufflinks 1.422        
cufflinks 0.514       Low
cufflinks 1.35        
cufflinks 1.086        
cufflinks 0.497       Low
cufflinks 1.357        
cufflinks 0.585       Low

0 Strain