Gene : Glyma.13G363900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11225 - NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN Genomic Order:  3639
Name:  ? Glyma.13G363900 Secondary Identifier:  ? PAC:30505284
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G363900 0.5kb upstream 0.5kb upstream 9046 true Chr13: 45047225-45056270 Glycine max
Glyma.13G363900 0.5kb upstream 0.5kb upstream 500 false Chr13: 45055771-45056270 Glycine max
Glyma.13G363900 0.5kb downstream 0.5kb downstream 9046 true Chr13: 45046725-45055770 Glycine max
Glyma.13G363900 0.5kb downstream 0.5kb downstream 500 false Chr13: 45046725-45047224 Glycine max
Glyma.13G363900 1.0kb upstream 1.0kb upstream 9546 true Chr13: 45047225-45056770 Glycine max
Glyma.13G363900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45055771-45056770 Glycine max
Glyma.13G363900 1.0kb downstream 1.0kb downstream 9546 true Chr13: 45046225-45055770 Glycine max
Glyma.13G363900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45046225-45047224 Glycine max
Glyma.13G363900 2.0kb upstream 2.0kb upstream 10546 true Chr13: 45047225-45057770 Glycine max
Glyma.13G363900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45055771-45057770 Glycine max
Glyma.13G363900 2.0kb downstream 2.0kb downstream 10546 true Chr13: 45045225-45055770 Glycine max
Glyma.13G363900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45045225-45047224 Glycine max
Glyma.13G363900 5.0kb upstream 5.0kb upstream 13546 true Chr13: 45047225-45060770 Glycine max
Glyma.13G363900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45055771-45060770 Glycine max
Glyma.13G363900 5.0kb downstream 5.0kb downstream 13546 true Chr13: 45042225-45055770 Glycine max
Glyma.13G363900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45042225-45047224 Glycine max
Glyma.13G363900 10.0kb upstream 10.0kb upstream 18546 true Chr13: 45047225-45065770 Glycine max
Glyma.13G363900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45055771-45065770 Glycine max
Glyma.13G363900 10.0kb downstream 10.0kb downstream 18546 true Chr13: 45037225-45055770 Glycine max
Glyma.13G363900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45037225-45047224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300861 5265 Fabidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.71377 0.0 15.4826    
cufflinks 10.4135 0.0 27.7846    
cufflinks 4.56071 0.0 12.5176   Low
cufflinks 9.48344 0.0 25.3026    
cufflinks 11.3044 0.0 30.1832    
cufflinks 6.01011 0.0 16.237    
cufflinks 17.8668 0.0 48.511   High
cufflinks 8.33399 0.0 22.269    
cufflinks 8.08317 0.0 21.6118    
cufflinks 3.483        
cufflinks 0.466       Low
cufflinks 3.25        
cufflinks 4.845        
cufflinks 6.035       High
cufflinks 1.156        
cufflinks 3.679        
cufflinks 1.387        
cufflinks 4.168        
cufflinks 5.63       High
cufflinks 2.974        
cufflinks 1.092       Low
cufflinks 3.344        
cufflinks 4.18        
cufflinks 0.762       Low
cufflinks 3.176        
cufflinks 1.554        

0 Strain