Gene : Glyma.13G364100 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  3641
Name:  ? Glyma.13G364100 Secondary Identifier:  ? PAC:30503054
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G364100 0.5kb upstream 0.5kb upstream 1356 true Chr13: 45065305-45066660 Glycine max
Glyma.13G364100 0.5kb upstream 0.5kb upstream 500 false Chr13: 45065305-45065804 Glycine max
Glyma.13G364100 0.5kb downstream 0.5kb downstream 1356 true Chr13: 45065805-45067160 Glycine max
Glyma.13G364100 0.5kb downstream 0.5kb downstream 500 false Chr13: 45066661-45067160 Glycine max
Glyma.13G364100 1.0kb upstream 1.0kb upstream 1856 true Chr13: 45064805-45066660 Glycine max
Glyma.13G364100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45064805-45065804 Glycine max
Glyma.13G364100 1.0kb downstream 1.0kb downstream 1856 true Chr13: 45065805-45067660 Glycine max
Glyma.13G364100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45066661-45067660 Glycine max
Glyma.13G364100 2.0kb upstream 2.0kb upstream 2856 true Chr13: 45063805-45066660 Glycine max
Glyma.13G364100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45063805-45065804 Glycine max
Glyma.13G364100 2.0kb downstream 2.0kb downstream 2856 true Chr13: 45065805-45068660 Glycine max
Glyma.13G364100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45066661-45068660 Glycine max
Glyma.13G364100 5.0kb upstream 5.0kb upstream 5856 true Chr13: 45060805-45066660 Glycine max
Glyma.13G364100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45060805-45065804 Glycine max
Glyma.13G364100 5.0kb downstream 5.0kb downstream 5856 true Chr13: 45065805-45071660 Glycine max
Glyma.13G364100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45066661-45071660 Glycine max
Glyma.13G364100 10.0kb upstream 10.0kb upstream 10856 true Chr13: 45055805-45066660 Glycine max
Glyma.13G364100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45055805-45065804 Glycine max
Glyma.13G364100 10.0kb downstream 10.0kb downstream 10856 true Chr13: 45065805-45076660 Glycine max
Glyma.13G364100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45066661-45076660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298552 5265 Fabidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0323156 0.0 0.146148 Low  
cufflinks 0.0307525 0.0 0.139463 Low  
cufflinks 0.0371128 0.0 0.164273 Low  
cufflinks 0.200441 0.0 0.799882    
cufflinks 3.29924 0.0 11.4328   High
cufflinks 4.71003 0.0 15.6927   High
cufflinks 0.112028 0.0 0.459547 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.866071 0.0 3.25894    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.02     Low Low
cufflinks 3.123       High
cufflinks 5.832       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 0.105        
cufflinks 0.035     Low  
cufflinks 0.139        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.143        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.172        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.333        

0 Strain