Gene : Glyma.13G354400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR27001:SF102 - LYSM DOMAIN RECEPTOR-LIKE KINASE 3 Genomic Order:  3544
Name:  ? Glyma.13G354400 Secondary Identifier:  ? PAC:30505245
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G354400 0.5kb upstream 0.5kb upstream 5834 true Chr13: 44280622-44286455 Glycine max
Glyma.13G354400 0.5kb upstream 0.5kb upstream 500 false Chr13: 44280622-44281121 Glycine max
Glyma.13G354400 0.5kb downstream 0.5kb downstream 5834 true Chr13: 44281122-44286955 Glycine max
Glyma.13G354400 0.5kb downstream 0.5kb downstream 500 false Chr13: 44286456-44286955 Glycine max
Glyma.13G354400 1.0kb upstream 1.0kb upstream 6334 true Chr13: 44280122-44286455 Glycine max
Glyma.13G354400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44280122-44281121 Glycine max
Glyma.13G354400 1.0kb downstream 1.0kb downstream 6334 true Chr13: 44281122-44287455 Glycine max
Glyma.13G354400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44286456-44287455 Glycine max
Glyma.13G354400 2.0kb upstream 2.0kb upstream 7334 true Chr13: 44279122-44286455 Glycine max
Glyma.13G354400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44279122-44281121 Glycine max
Glyma.13G354400 2.0kb downstream 2.0kb downstream 7334 true Chr13: 44281122-44288455 Glycine max
Glyma.13G354400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44286456-44288455 Glycine max
Glyma.13G354400 5.0kb upstream 5.0kb upstream 10334 true Chr13: 44276122-44286455 Glycine max
Glyma.13G354400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44276122-44281121 Glycine max
Glyma.13G354400 5.0kb downstream 5.0kb downstream 10334 true Chr13: 44281122-44291455 Glycine max
Glyma.13G354400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44286456-44291455 Glycine max
Glyma.13G354400 10.0kb upstream 10.0kb upstream 15334 true Chr13: 44271122-44286455 Glycine max
Glyma.13G354400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44271122-44281121 Glycine max
Glyma.13G354400 10.0kb downstream 10.0kb downstream 15334 true Chr13: 44281122-44296455 Glycine max
Glyma.13G354400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44286456-44296455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253712 5265 Fabidae View MSA
123996195 5270 Rosid View MSA
123570715 5271 Pentapetalae View MSA
122605450 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136685 0.0 0.662606 Low Low
cufflinks 0.907664 0.0 3.67235    
cufflinks 0.839924 0.0 3.36842    
cufflinks 0.394307 0.0 1.82325    
cufflinks 1.97626 0.0 6.49517   High
cufflinks 1.02962 0.0 4.06679    
cufflinks 0.447657 0.0 2.69128    
cufflinks 0.587484 0.0 2.58017    
cufflinks 0.293243 0.0 1.44688    
cufflinks 1.365       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.211        
cufflinks 0.36        
cufflinks 0.582        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.306        
cufflinks 0.023     Low  
cufflinks 0.597        
cufflinks 0.209        
cufflinks 0.15        
cufflinks 0.002     Low Low
cufflinks 0.227        
cufflinks 0.16        
cufflinks 0.005     Low Low
cufflinks 0.173        
cufflinks 0.018     Low Low

0 Strain