Gene : Glyma.13G355400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  3554
Name:  ? Glyma.13G355400 Secondary Identifier:  ? PAC:30501719
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G355400 0.5kb upstream 0.5kb upstream 7279 true Chr13: 44395730-44403008 Glycine max
Glyma.13G355400 0.5kb upstream 0.5kb upstream 500 false Chr13: 44395730-44396229 Glycine max
Glyma.13G355400 0.5kb downstream 0.5kb downstream 7279 true Chr13: 44396230-44403508 Glycine max
Glyma.13G355400 0.5kb downstream 0.5kb downstream 500 false Chr13: 44403009-44403508 Glycine max
Glyma.13G355400 1.0kb upstream 1.0kb upstream 7779 true Chr13: 44395230-44403008 Glycine max
Glyma.13G355400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44395230-44396229 Glycine max
Glyma.13G355400 1.0kb downstream 1.0kb downstream 7779 true Chr13: 44396230-44404008 Glycine max
Glyma.13G355400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44403009-44404008 Glycine max
Glyma.13G355400 2.0kb upstream 2.0kb upstream 8779 true Chr13: 44394230-44403008 Glycine max
Glyma.13G355400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44394230-44396229 Glycine max
Glyma.13G355400 2.0kb downstream 2.0kb downstream 8779 true Chr13: 44396230-44405008 Glycine max
Glyma.13G355400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44403009-44405008 Glycine max
Glyma.13G355400 5.0kb upstream 5.0kb upstream 11779 true Chr13: 44391230-44403008 Glycine max
Glyma.13G355400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44391230-44396229 Glycine max
Glyma.13G355400 5.0kb downstream 5.0kb downstream 11779 true Chr13: 44396230-44408008 Glycine max
Glyma.13G355400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44403009-44408008 Glycine max
Glyma.13G355400 10.0kb upstream 10.0kb upstream 16779 true Chr13: 44386230-44403008 Glycine max
Glyma.13G355400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44386230-44396229 Glycine max
Glyma.13G355400 10.0kb downstream 10.0kb downstream 16779 true Chr13: 44396230-44413008 Glycine max
Glyma.13G355400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44403009-44413008 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306088 5265 Fabidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.85558 0.0 23.6319   High
cufflinks 5.9801 0.0 16.0521    
cufflinks 4.8988 0.0 13.2475    
cufflinks 5.40247 0.0 14.5486    
cufflinks 5.83586 0.0 15.6637    
cufflinks 3.29781 0.0 9.18538   Low
cufflinks 5.14292 0.0 13.8764    
cufflinks 5.17369 0.0 13.9641    
cufflinks 4.84377 0.0 13.1185    
cufflinks 4.005        
cufflinks 1.38       Low
cufflinks 4.61        
cufflinks 4.74        
cufflinks 5.539        
cufflinks 1.551       Low
cufflinks 8.548     High High
cufflinks 2.609        
cufflinks 4.915        
cufflinks 6.104        
cufflinks 8.097     High High
cufflinks 1.489       Low
cufflinks 8.219     High High
cufflinks 10.817     High High
cufflinks 1.945       Low
cufflinks 7.697     High  
cufflinks 2.395        

0 Strain