Gene : Glyma.13G356000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR19139:SF99 - AQUAPORIN TIP2-1 Genomic Order:  3560
Name:  ? Glyma.13G356000 Secondary Identifier:  ? PAC:30500782
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G356000 0.5kb upstream 0.5kb upstream 2029 true Chr13: 44442189-44444217 Glycine max
Glyma.13G356000 0.5kb upstream 0.5kb upstream 500 false Chr13: 44442189-44442688 Glycine max
Glyma.13G356000 0.5kb downstream 0.5kb downstream 2029 true Chr13: 44442689-44444717 Glycine max
Glyma.13G356000 0.5kb downstream 0.5kb downstream 500 false Chr13: 44444218-44444717 Glycine max
Glyma.13G356000 1.0kb upstream 1.0kb upstream 2529 true Chr13: 44441689-44444217 Glycine max
Glyma.13G356000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44441689-44442688 Glycine max
Glyma.13G356000 1.0kb downstream 1.0kb downstream 2529 true Chr13: 44442689-44445217 Glycine max
Glyma.13G356000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44444218-44445217 Glycine max
Glyma.13G356000 2.0kb upstream 2.0kb upstream 3529 true Chr13: 44440689-44444217 Glycine max
Glyma.13G356000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44440689-44442688 Glycine max
Glyma.13G356000 2.0kb downstream 2.0kb downstream 3529 true Chr13: 44442689-44446217 Glycine max
Glyma.13G356000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44444218-44446217 Glycine max
Glyma.13G356000 5.0kb upstream 5.0kb upstream 6529 true Chr13: 44437689-44444217 Glycine max
Glyma.13G356000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44437689-44442688 Glycine max
Glyma.13G356000 5.0kb downstream 5.0kb downstream 6529 true Chr13: 44442689-44449217 Glycine max
Glyma.13G356000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44444218-44449217 Glycine max
Glyma.13G356000 10.0kb upstream 10.0kb upstream 11529 true Chr13: 44432689-44444217 Glycine max
Glyma.13G356000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44432689-44442688 Glycine max
Glyma.13G356000 10.0kb downstream 10.0kb downstream 11529 true Chr13: 44442689-44454217 Glycine max
Glyma.13G356000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44444218-44454217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254460 5265 Fabidae View MSA
123996608 5270 Rosid View MSA
123571045 5271 Pentapetalae View MSA
122605775 5272 Eudicot View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.33191 0.0 1.2893   Low
cufflinks 5.01251 0.0 15.9714    
cufflinks 7.19094 0.0 21.7045    
cufflinks 39.5189 0.0 105.482 High  
cufflinks 20.8832 0.0 56.5153 High  
cufflinks 18.0402 0.0 49.2029    
cufflinks 45.0535 0.0 120.577 High  
cufflinks 61.3702 0.0 166.51 High High
cufflinks 10.932 0.0 31.2015    
cufflinks 41.72     High High
cufflinks 0.585        
cufflinks 6.082        
cufflinks 25.455     High  
cufflinks 19.914     High  
cufflinks 0.051     Low Low
cufflinks 18.978     High  
cufflinks 0.269       Low
cufflinks 10.743     High  
cufflinks 0.947        
cufflinks 19.523     High  
cufflinks 3.065        
cufflinks 16.096     High  
cufflinks 15.423     High  
cufflinks 0.399       Low
cufflinks 17.656     High  
cufflinks 1.177        

0 Strain