Gene : Glyma.13G359200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31852:SF17 - EXPRESSED PROTEIN Genomic Order:  3592
Name:  ? Glyma.13G359200 Secondary Identifier:  ? PAC:30503810
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G359200 0.5kb upstream 0.5kb upstream 2623 true Chr13: 44650621-44653243 Glycine max
Glyma.13G359200 0.5kb upstream 0.5kb upstream 500 false Chr13: 44650621-44651120 Glycine max
Glyma.13G359200 0.5kb downstream 0.5kb downstream 2623 true Chr13: 44651121-44653743 Glycine max
Glyma.13G359200 0.5kb downstream 0.5kb downstream 500 false Chr13: 44653244-44653743 Glycine max
Glyma.13G359200 1.0kb upstream 1.0kb upstream 3123 true Chr13: 44650121-44653243 Glycine max
Glyma.13G359200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44650121-44651120 Glycine max
Glyma.13G359200 1.0kb downstream 1.0kb downstream 3123 true Chr13: 44651121-44654243 Glycine max
Glyma.13G359200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44653244-44654243 Glycine max
Glyma.13G359200 2.0kb upstream 2.0kb upstream 4123 true Chr13: 44649121-44653243 Glycine max
Glyma.13G359200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44649121-44651120 Glycine max
Glyma.13G359200 2.0kb downstream 2.0kb downstream 4123 true Chr13: 44651121-44655243 Glycine max
Glyma.13G359200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44653244-44655243 Glycine max
Glyma.13G359200 5.0kb upstream 5.0kb upstream 7123 true Chr13: 44646121-44653243 Glycine max
Glyma.13G359200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44646121-44651120 Glycine max
Glyma.13G359200 5.0kb downstream 5.0kb downstream 7123 true Chr13: 44651121-44658243 Glycine max
Glyma.13G359200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44653244-44658243 Glycine max
Glyma.13G359200 10.0kb upstream 10.0kb upstream 12123 true Chr13: 44641121-44653243 Glycine max
Glyma.13G359200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44641121-44651120 Glycine max
Glyma.13G359200 10.0kb downstream 10.0kb downstream 12123 true Chr13: 44651121-44663243 Glycine max
Glyma.13G359200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44653244-44663243 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308559 5265 Fabidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.263486 0.0 1.03188   Low
cufflinks 2.18906 0.0 7.68329    
cufflinks 1.98753 0.0 7.02191    
cufflinks 9.84169 0.0 28.5095   High
cufflinks 0.671468 0.0 2.52316    
cufflinks 0.0892081 0.0 0.36473 Low Low
cufflinks 6.6331 0.0 20.1774   High
cufflinks 4.73032 0.0 15.1682    
cufflinks 0.707333 0.0 2.65327    
cufflinks 3.461       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.706        
cufflinks 0.178        
cufflinks 0.192        
cufflinks 0.035     Low Low
cufflinks 0.352        
cufflinks 0.096        
cufflinks 0.837        
cufflinks 2.672       High
cufflinks 0.411        
cufflinks 0.021     Low Low
cufflinks 0.58        
cufflinks 3.635       High
cufflinks 0.018     Low Low
cufflinks 0.543        
cufflinks 0.08        

0 Strain