Gene : Glyma.13G349600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23421:SF13 - BETA-GALACTOSIDASE Genomic Order:  3496
Name:  ? Glyma.13G349600 Secondary Identifier:  ? PAC:30505195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G349600 0.5kb upstream 0.5kb upstream 10971 true Chr13: 43931577-43942547 Glycine max
Glyma.13G349600 0.5kb upstream 0.5kb upstream 500 false Chr13: 43931577-43932076 Glycine max
Glyma.13G349600 0.5kb downstream 0.5kb downstream 10971 true Chr13: 43932077-43943047 Glycine max
Glyma.13G349600 0.5kb downstream 0.5kb downstream 500 false Chr13: 43942548-43943047 Glycine max
Glyma.13G349600 1.0kb upstream 1.0kb upstream 11471 true Chr13: 43931077-43942547 Glycine max
Glyma.13G349600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43931077-43932076 Glycine max
Glyma.13G349600 1.0kb downstream 1.0kb downstream 11471 true Chr13: 43932077-43943547 Glycine max
Glyma.13G349600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43942548-43943547 Glycine max
Glyma.13G349600 2.0kb upstream 2.0kb upstream 12471 true Chr13: 43930077-43942547 Glycine max
Glyma.13G349600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43930077-43932076 Glycine max
Glyma.13G349600 2.0kb downstream 2.0kb downstream 12471 true Chr13: 43932077-43944547 Glycine max
Glyma.13G349600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43942548-43944547 Glycine max
Glyma.13G349600 5.0kb upstream 5.0kb upstream 15471 true Chr13: 43927077-43942547 Glycine max
Glyma.13G349600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43927077-43932076 Glycine max
Glyma.13G349600 5.0kb downstream 5.0kb downstream 15471 true Chr13: 43932077-43947547 Glycine max
Glyma.13G349600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43942548-43947547 Glycine max
Glyma.13G349600 10.0kb upstream 10.0kb upstream 20471 true Chr13: 43922077-43942547 Glycine max
Glyma.13G349600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43922077-43932076 Glycine max
Glyma.13G349600 10.0kb downstream 10.0kb downstream 20471 true Chr13: 43932077-43952547 Glycine max
Glyma.13G349600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43942548-43952547 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300034 5265 Fabidae View MSA
124062395 5270 Rosid View MSA
123738318 5271 Pentapetalae View MSA
122790635 5272 Eudicot View MSA
122047626 5273 Angiosperm View MSA
121345456 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.35612 0.0 26.7282   Low
cufflinks 16.3228 0.0 56.3741    
cufflinks 6.11275 0.0 19.4613   Low
cufflinks 26.821 0.0 98.7996 High High
cufflinks 13.1411 0.0 39.0889    
cufflinks 16.5664 0.0 49.614    
cufflinks 24.3902 0.0 88.4625 High High
cufflinks 12.6874 0.0 44.3145    
cufflinks 11.8641 0.0 41.2007    
cufflinks 1.277        
cufflinks 0.415       Low
cufflinks 0.992        
cufflinks 1.445       High
cufflinks 1.375        
cufflinks 0.458       Low
cufflinks 0.928        
cufflinks 0.747        
cufflinks 1.129        
cufflinks 2.024       High
cufflinks 1.004        
cufflinks 0.662        
cufflinks 1.012        
cufflinks 0.738        
cufflinks 0.569       Low
cufflinks 0.927        
cufflinks 1.179        

0 Strain