Gene : Glyma.13G350500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22850:SF85 - WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED Genomic Order:  3505
Name:  ? Glyma.13G350500 Secondary Identifier:  ? PAC:30503278
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G350500 0.5kb upstream 0.5kb upstream 6426 true Chr13: 43995821-44002246 Glycine max
Glyma.13G350500 0.5kb upstream 0.5kb upstream 500 false Chr13: 43995821-43996320 Glycine max
Glyma.13G350500 0.5kb downstream 0.5kb downstream 6426 true Chr13: 43996321-44002746 Glycine max
Glyma.13G350500 0.5kb downstream 0.5kb downstream 500 false Chr13: 44002247-44002746 Glycine max
Glyma.13G350500 1.0kb upstream 1.0kb upstream 6926 true Chr13: 43995321-44002246 Glycine max
Glyma.13G350500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43995321-43996320 Glycine max
Glyma.13G350500 1.0kb downstream 1.0kb downstream 6926 true Chr13: 43996321-44003246 Glycine max
Glyma.13G350500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44002247-44003246 Glycine max
Glyma.13G350500 2.0kb upstream 2.0kb upstream 7926 true Chr13: 43994321-44002246 Glycine max
Glyma.13G350500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43994321-43996320 Glycine max
Glyma.13G350500 2.0kb downstream 2.0kb downstream 7926 true Chr13: 43996321-44004246 Glycine max
Glyma.13G350500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44002247-44004246 Glycine max
Glyma.13G350500 5.0kb upstream 5.0kb upstream 10926 true Chr13: 43991321-44002246 Glycine max
Glyma.13G350500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43991321-43996320 Glycine max
Glyma.13G350500 5.0kb downstream 5.0kb downstream 10926 true Chr13: 43996321-44007246 Glycine max
Glyma.13G350500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44002247-44007246 Glycine max
Glyma.13G350500 10.0kb upstream 10.0kb upstream 15926 true Chr13: 43986321-44002246 Glycine max
Glyma.13G350500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43986321-43996320 Glycine max
Glyma.13G350500 10.0kb downstream 10.0kb downstream 15926 true Chr13: 43996321-44012246 Glycine max
Glyma.13G350500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44002247-44012246 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122296794 5265 Fabidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02744 0.0 11.3551   Low
cufflinks 10.6674 0.0 32.1412   High
cufflinks 2.3192 0.0 8.96957    
cufflinks 3.79005 0.0 12.5996    
cufflinks 7.57257 0.0 23.8893    
cufflinks 5.60033 0.0 18.5504    
cufflinks 4.28828 0.0 19.9899    
cufflinks 4.21132 0.0 13.5225    
cufflinks 5.79875 0.0 21.7981    
cufflinks 0.684        
cufflinks 0.153       Low
cufflinks 0.419        
cufflinks 1.33       High
cufflinks 1.601       High
cufflinks 0.163       Low
cufflinks 0.651        
cufflinks 0.387        
cufflinks 0.241        
cufflinks 1.776       High
cufflinks 0.441        
cufflinks 0.256        
cufflinks 0.569        
cufflinks 1.418       High
cufflinks 0.208       Low
cufflinks 0.528        
cufflinks 0.35        

0 Strain