Gene : Glyma.13G350700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  3507
Name:  ? Glyma.13G350700 Secondary Identifier:  ? PAC:30502577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G350700 0.5kb upstream 0.5kb upstream 7117 true Chr13: 44006167-44013283 Glycine max
Glyma.13G350700 0.5kb upstream 0.5kb upstream 500 false Chr13: 44012784-44013283 Glycine max
Glyma.13G350700 0.5kb downstream 0.5kb downstream 7117 true Chr13: 44005667-44012783 Glycine max
Glyma.13G350700 0.5kb downstream 0.5kb downstream 500 false Chr13: 44005667-44006166 Glycine max
Glyma.13G350700 1.0kb upstream 1.0kb upstream 7617 true Chr13: 44006167-44013783 Glycine max
Glyma.13G350700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44012784-44013783 Glycine max
Glyma.13G350700 1.0kb downstream 1.0kb downstream 7617 true Chr13: 44005167-44012783 Glycine max
Glyma.13G350700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44005167-44006166 Glycine max
Glyma.13G350700 2.0kb upstream 2.0kb upstream 8617 true Chr13: 44006167-44014783 Glycine max
Glyma.13G350700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44012784-44014783 Glycine max
Glyma.13G350700 2.0kb downstream 2.0kb downstream 8617 true Chr13: 44004167-44012783 Glycine max
Glyma.13G350700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44004167-44006166 Glycine max
Glyma.13G350700 5.0kb upstream 5.0kb upstream 11617 true Chr13: 44006167-44017783 Glycine max
Glyma.13G350700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44012784-44017783 Glycine max
Glyma.13G350700 5.0kb downstream 5.0kb downstream 11617 true Chr13: 44001167-44012783 Glycine max
Glyma.13G350700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44001167-44006166 Glycine max
Glyma.13G350700 10.0kb upstream 10.0kb upstream 16617 true Chr13: 44006167-44022783 Glycine max
Glyma.13G350700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44012784-44022783 Glycine max
Glyma.13G350700 10.0kb downstream 10.0kb downstream 16617 true Chr13: 43996167-44012783 Glycine max
Glyma.13G350700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43996167-44006166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310260 5265 Fabidae View MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05627 0.0 3.47318   Low
cufflinks 5.79142 0.0 15.642    
cufflinks 3.83383 0.0 10.6161    
cufflinks 4.66626 0.0 12.7555    
cufflinks 12.7115 0.0 34.0525   High
cufflinks 5.30525 0.0 14.3894    
cufflinks 2.35358 0.0 6.9326    
cufflinks 9.41151 0.0 25.1089    
cufflinks 10.3116 0.0 27.5218    
cufflinks 12.882     High High
cufflinks 3.226        
cufflinks 4.033        
cufflinks 10.686     High  
cufflinks 12.587     High High
cufflinks 1.132       Low
cufflinks 12.912     High High
cufflinks 3.043        
cufflinks 3.472        
cufflinks 4.791        
cufflinks 10.442     High  
cufflinks 2.486       Low
cufflinks 6.99        
cufflinks 4.786        
cufflinks 2.914        
cufflinks 14.475     High High
cufflinks 3.686        

0 Strain