Gene : Glyma.13G351500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  3515
Name:  ? Glyma.13G351500 Secondary Identifier:  ? PAC:30506021
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G351500 0.5kb upstream 0.5kb upstream 4456 true Chr13: 44056773-44061228 Glycine max
Glyma.13G351500 0.5kb upstream 0.5kb upstream 500 false Chr13: 44060729-44061228 Glycine max
Glyma.13G351500 0.5kb downstream 0.5kb downstream 4456 true Chr13: 44056273-44060728 Glycine max
Glyma.13G351500 0.5kb downstream 0.5kb downstream 500 false Chr13: 44056273-44056772 Glycine max
Glyma.13G351500 1.0kb upstream 1.0kb upstream 4956 true Chr13: 44056773-44061728 Glycine max
Glyma.13G351500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44060729-44061728 Glycine max
Glyma.13G351500 1.0kb downstream 1.0kb downstream 4956 true Chr13: 44055773-44060728 Glycine max
Glyma.13G351500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44055773-44056772 Glycine max
Glyma.13G351500 2.0kb upstream 2.0kb upstream 5956 true Chr13: 44056773-44062728 Glycine max
Glyma.13G351500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44060729-44062728 Glycine max
Glyma.13G351500 2.0kb downstream 2.0kb downstream 5956 true Chr13: 44054773-44060728 Glycine max
Glyma.13G351500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44054773-44056772 Glycine max
Glyma.13G351500 5.0kb upstream 5.0kb upstream 8956 true Chr13: 44056773-44065728 Glycine max
Glyma.13G351500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44060729-44065728 Glycine max
Glyma.13G351500 5.0kb downstream 5.0kb downstream 8956 true Chr13: 44051773-44060728 Glycine max
Glyma.13G351500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44051773-44056772 Glycine max
Glyma.13G351500 10.0kb upstream 10.0kb upstream 13956 true Chr13: 44056773-44070728 Glycine max
Glyma.13G351500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44060729-44070728 Glycine max
Glyma.13G351500 10.0kb downstream 10.0kb downstream 13956 true Chr13: 44046773-44060728 Glycine max
Glyma.13G351500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44046773-44056772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296344 5265 Fabidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80998 0.0 5.84193    
cufflinks 3.23202 0.0 9.61351    
cufflinks 1.48425 0.0 4.90023    
cufflinks 6.21838 0.0 17.1465   High
cufflinks 2.63206 0.0 8.05777    
cufflinks 0.557506 0.0 2.01983   Low
cufflinks 2.02683 0.0 6.45096    
cufflinks 5.61981 0.0 15.6302   High
cufflinks 2.78468 0.0 8.45116    
cufflinks 3.701        
cufflinks 0.578       Low
cufflinks 3.231        
cufflinks 1.249        
cufflinks 1.336        
cufflinks 0.898        
cufflinks 4.652        
cufflinks 0.586       Low
cufflinks 14.335     High High
cufflinks 3.482        
cufflinks 5.145        
cufflinks 1.227        
cufflinks 6.846       High
cufflinks 3.959        
cufflinks 0.186       Low
cufflinks 5.911        
cufflinks 0.86        

0 Strain