Gene : Glyma.13G352100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10544 - 60S RIBOSOMAL PROTEIN L28 Genomic Order:  3521
Name:  ? Glyma.13G352100 Secondary Identifier:  ? PAC:30504615
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G352100 0.5kb upstream 0.5kb upstream 4050 true Chr13: 44108346-44112395 Glycine max
Glyma.13G352100 0.5kb upstream 0.5kb upstream 500 false Chr13: 44108346-44108845 Glycine max
Glyma.13G352100 0.5kb downstream 0.5kb downstream 4050 true Chr13: 44108846-44112895 Glycine max
Glyma.13G352100 0.5kb downstream 0.5kb downstream 500 false Chr13: 44112396-44112895 Glycine max
Glyma.13G352100 1.0kb upstream 1.0kb upstream 4550 true Chr13: 44107846-44112395 Glycine max
Glyma.13G352100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44107846-44108845 Glycine max
Glyma.13G352100 1.0kb downstream 1.0kb downstream 4550 true Chr13: 44108846-44113395 Glycine max
Glyma.13G352100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44112396-44113395 Glycine max
Glyma.13G352100 2.0kb upstream 2.0kb upstream 5550 true Chr13: 44106846-44112395 Glycine max
Glyma.13G352100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44106846-44108845 Glycine max
Glyma.13G352100 2.0kb downstream 2.0kb downstream 5550 true Chr13: 44108846-44114395 Glycine max
Glyma.13G352100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44112396-44114395 Glycine max
Glyma.13G352100 5.0kb upstream 5.0kb upstream 8550 true Chr13: 44103846-44112395 Glycine max
Glyma.13G352100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44103846-44108845 Glycine max
Glyma.13G352100 5.0kb downstream 5.0kb downstream 8550 true Chr13: 44108846-44117395 Glycine max
Glyma.13G352100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44112396-44117395 Glycine max
Glyma.13G352100 10.0kb upstream 10.0kb upstream 13550 true Chr13: 44098846-44112395 Glycine max
Glyma.13G352100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44098846-44108845 Glycine max
Glyma.13G352100 10.0kb downstream 10.0kb downstream 13550 true Chr13: 44108846-44122395 Glycine max
Glyma.13G352100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44112396-44122395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314116 5265 Fabidae View MSA
124072895 5270 Rosid View MSA
123746197 5271 Pentapetalae View MSA
122786933 5272 Eudicot View MSA
122049250 5273 Angiosperm View MSA
121348923 5274 Embryophyte View MSA
123424789 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.0047 0.0 204.512 High  
cufflinks 100.144 0.0 280.102 High  
cufflinks 32.878 0.0 87.829 High Low
cufflinks 58.4454 0.0 157.414 High  
cufflinks 181.854 0.0 553.878 High High
cufflinks 151.895 0.0 447.426 High High
cufflinks 82.7001 0.0 227.564 High  
cufflinks 85.2257 0.0 235.744 High  
cufflinks 111.896 0.0 317.757 High  
cufflinks 22.444     High  
cufflinks 6.117     High Low
cufflinks 15.647     High  
cufflinks 69.245     High High
cufflinks 100.795     High High
cufflinks 3.943       Low
cufflinks 20.488     High  
cufflinks 13.771     High  
cufflinks 18.282     High  
cufflinks 23.085     High  
cufflinks 13.567     High  
cufflinks 10.958     High  
cufflinks 14.821     High  
cufflinks 26.642     High  
cufflinks 8.341     High  
cufflinks 18.143     High  
cufflinks 14.355     High  

0 Strain