Gene : Glyma.13G352400 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  3524
Name:  ? Glyma.13G352400 Secondary Identifier:  ? PAC:30504962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G352400 0.5kb upstream 0.5kb upstream 4694 true Chr13: 44126301-44130994 Glycine max
Glyma.13G352400 0.5kb upstream 0.5kb upstream 500 false Chr13: 44126301-44126800 Glycine max
Glyma.13G352400 0.5kb downstream 0.5kb downstream 4694 true Chr13: 44126801-44131494 Glycine max
Glyma.13G352400 0.5kb downstream 0.5kb downstream 500 false Chr13: 44130995-44131494 Glycine max
Glyma.13G352400 1.0kb upstream 1.0kb upstream 5194 true Chr13: 44125801-44130994 Glycine max
Glyma.13G352400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44125801-44126800 Glycine max
Glyma.13G352400 1.0kb downstream 1.0kb downstream 5194 true Chr13: 44126801-44131994 Glycine max
Glyma.13G352400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44130995-44131994 Glycine max
Glyma.13G352400 2.0kb upstream 2.0kb upstream 6194 true Chr13: 44124801-44130994 Glycine max
Glyma.13G352400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44124801-44126800 Glycine max
Glyma.13G352400 2.0kb downstream 2.0kb downstream 6194 true Chr13: 44126801-44132994 Glycine max
Glyma.13G352400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44130995-44132994 Glycine max
Glyma.13G352400 5.0kb upstream 5.0kb upstream 9194 true Chr13: 44121801-44130994 Glycine max
Glyma.13G352400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44121801-44126800 Glycine max
Glyma.13G352400 5.0kb downstream 5.0kb downstream 9194 true Chr13: 44126801-44135994 Glycine max
Glyma.13G352400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44130995-44135994 Glycine max
Glyma.13G352400 10.0kb upstream 10.0kb upstream 14194 true Chr13: 44116801-44130994 Glycine max
Glyma.13G352400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44116801-44126800 Glycine max
Glyma.13G352400 10.0kb downstream 10.0kb downstream 14194 true Chr13: 44126801-44140994 Glycine max
Glyma.13G352400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44130995-44140994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305039 5265 Fabidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8863 0.0 75.5385 High  
cufflinks 12.4376 0.0 58.2205   Low
cufflinks 23.5548 0.0 91.1818 High  
cufflinks 28.9261 0.0 115.067 High  
cufflinks 21.7761 0.0 65.3545 High  
cufflinks 23.028 0.0 69.3074 High  
cufflinks 84.4919 0.0 386.33 High High
cufflinks 24.2832 0.0 73.5409 High  
cufflinks 19.2254 0.0 57.3811    
cufflinks 3.895        
cufflinks 0.983       Low
cufflinks 3.635        
cufflinks 4.631       High
cufflinks 3.974       High
cufflinks 1.445       Low
cufflinks 1.965        
cufflinks 3.168        
cufflinks 4.082       High
cufflinks 3.917        
cufflinks 2.19        
cufflinks 1.239       Low
cufflinks 2.427        
cufflinks 2.284        
cufflinks 2.841        
cufflinks 2.156        
cufflinks 1.664        

0 Strain