Gene : Glyma.13G343700 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG1921 - Endonuclease III Genomic Order:  3437
Name:  ? Glyma.13G343700 Secondary Identifier:  ? PAC:30504906
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G343700 0.5kb upstream 0.5kb upstream 5302 true Chr13: 43498244-43503545 Glycine max
Glyma.13G343700 0.5kb upstream 0.5kb upstream 500 false Chr13: 43503046-43503545 Glycine max
Glyma.13G343700 0.5kb downstream 0.5kb downstream 5302 true Chr13: 43497744-43503045 Glycine max
Glyma.13G343700 0.5kb downstream 0.5kb downstream 500 false Chr13: 43497744-43498243 Glycine max
Glyma.13G343700 1.0kb upstream 1.0kb upstream 5802 true Chr13: 43498244-43504045 Glycine max
Glyma.13G343700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43503046-43504045 Glycine max
Glyma.13G343700 1.0kb downstream 1.0kb downstream 5802 true Chr13: 43497244-43503045 Glycine max
Glyma.13G343700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43497244-43498243 Glycine max
Glyma.13G343700 2.0kb upstream 2.0kb upstream 6802 true Chr13: 43498244-43505045 Glycine max
Glyma.13G343700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43503046-43505045 Glycine max
Glyma.13G343700 2.0kb downstream 2.0kb downstream 6802 true Chr13: 43496244-43503045 Glycine max
Glyma.13G343700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43496244-43498243 Glycine max
Glyma.13G343700 5.0kb upstream 5.0kb upstream 9802 true Chr13: 43498244-43508045 Glycine max
Glyma.13G343700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43503046-43508045 Glycine max
Glyma.13G343700 5.0kb downstream 5.0kb downstream 9802 true Chr13: 43493244-43503045 Glycine max
Glyma.13G343700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43493244-43498243 Glycine max
Glyma.13G343700 10.0kb upstream 10.0kb upstream 14802 true Chr13: 43498244-43513045 Glycine max
Glyma.13G343700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43503046-43513045 Glycine max
Glyma.13G343700 10.0kb downstream 10.0kb downstream 14802 true Chr13: 43488244-43503045 Glycine max
Glyma.13G343700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43488244-43498243 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041361 5273 Angiosperm View MSA
122296840 5265 Fabidae View MSA
124060814 5270 Rosid View MSA
123745543 5271 Pentapetalae View MSA
122791789 5272 Eudicot View MSA
121344873 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29456 0.0 32.0353    
cufflinks 4.00748 0.0 25.3149    
cufflinks 2.55313 0.0 12.9084    
cufflinks 4.3242 0.0 29.722    
cufflinks 1.09838 0.0 6.63306   Low
cufflinks 1.04313 0.0 9.15183   Low
cufflinks 1.71969 0.0 14.3423    
cufflinks 4.72058 0.0 34.6855   High
cufflinks 2.7315 0.0 20.1592    
cufflinks 0.109        
cufflinks 0.007     Low Low
cufflinks 0.14        
cufflinks 0.026     Low  
cufflinks 0.045     Low  
cufflinks 0.015     Low Low
cufflinks 0.148        
cufflinks 0.031     Low  
cufflinks 0.21       High
cufflinks 0.148        
cufflinks 0.17        
cufflinks 0.012     Low Low
cufflinks 0.178        
cufflinks 0.207       High
cufflinks 0.011     Low Low
cufflinks 0.163        
cufflinks 0.024     Low  

0 Strain