Gene : Glyma.13G345600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10965//PTHR10965:SF3 - 60S RIBOSOMAL PROTEIN L38 Genomic Order:  3456
Name:  ? Glyma.13G345600 Secondary Identifier:  ? PAC:30505736
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G345600 0.5kb upstream 0.5kb upstream 2359 true Chr13: 43622980-43625338 Glycine max
Glyma.13G345600 0.5kb upstream 0.5kb upstream 500 false Chr13: 43624839-43625338 Glycine max
Glyma.13G345600 0.5kb downstream 0.5kb downstream 2359 true Chr13: 43622480-43624838 Glycine max
Glyma.13G345600 0.5kb downstream 0.5kb downstream 500 false Chr13: 43622480-43622979 Glycine max
Glyma.13G345600 1.0kb upstream 1.0kb upstream 2859 true Chr13: 43622980-43625838 Glycine max
Glyma.13G345600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43624839-43625838 Glycine max
Glyma.13G345600 1.0kb downstream 1.0kb downstream 2859 true Chr13: 43621980-43624838 Glycine max
Glyma.13G345600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43621980-43622979 Glycine max
Glyma.13G345600 2.0kb upstream 2.0kb upstream 3859 true Chr13: 43622980-43626838 Glycine max
Glyma.13G345600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43624839-43626838 Glycine max
Glyma.13G345600 2.0kb downstream 2.0kb downstream 3859 true Chr13: 43620980-43624838 Glycine max
Glyma.13G345600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43620980-43622979 Glycine max
Glyma.13G345600 5.0kb upstream 5.0kb upstream 6859 true Chr13: 43622980-43629838 Glycine max
Glyma.13G345600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43624839-43629838 Glycine max
Glyma.13G345600 5.0kb downstream 5.0kb downstream 6859 true Chr13: 43617980-43624838 Glycine max
Glyma.13G345600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43617980-43622979 Glycine max
Glyma.13G345600 10.0kb upstream 10.0kb upstream 11859 true Chr13: 43622980-43634838 Glycine max
Glyma.13G345600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43624839-43634838 Glycine max
Glyma.13G345600 10.0kb downstream 10.0kb downstream 11859 true Chr13: 43612980-43624838 Glycine max
Glyma.13G345600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43612980-43622979 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029666 5273 Angiosperm View MSA
122315298 5265 Fabidae View MSA
124074373 5270 Rosid View MSA
123750152 5271 Pentapetalae View MSA
122794948 5272 Eudicot View MSA
121351263 5274 Embryophyte View MSA
123428665 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7667 0.0 143.495 High  
cufflinks 91.3811 0.0 246.64 High  
cufflinks 34.6261 0.0 93.4089 High Low
cufflinks 31.5925 0.0 85.7369 High Low
cufflinks 125.691 0.0 346.899 High High
cufflinks 128.301 0.0 354.404 High High
cufflinks 95.3571 0.0 257.909 High  
cufflinks 74.0169 0.0 198.178 High  
cufflinks 80.6815 0.0 216.618 High  
cufflinks 19.683     High  
cufflinks 8.436     High Low
cufflinks 15.265     High  
cufflinks 58.973     High High
cufflinks 94.703     High High
cufflinks 7.949     High Low
cufflinks 21.938     High  
cufflinks 14.031     High  
cufflinks 14.514     High  
cufflinks 27.526     High  
cufflinks 13.851     High  
cufflinks 13.177     High  
cufflinks 16.037     High  
cufflinks 20.415     High  
cufflinks 10.053     High  
cufflinks 20.378     High  
cufflinks 15.4     High  

0 Strain