Gene : Glyma.13G346000 G. max Wm82.a2.v1
Defline:  (1 of 8) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  3460
Name:  ? Glyma.13G346000 Secondary Identifier:  ? PAC:30505512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G346000 0.5kb upstream 0.5kb upstream 6732 true Chr13: 43655654-43662385 Glycine max
Glyma.13G346000 0.5kb upstream 0.5kb upstream 500 false Chr13: 43661886-43662385 Glycine max
Glyma.13G346000 0.5kb downstream 0.5kb downstream 6732 true Chr13: 43655154-43661885 Glycine max
Glyma.13G346000 0.5kb downstream 0.5kb downstream 500 false Chr13: 43655154-43655653 Glycine max
Glyma.13G346000 1.0kb upstream 1.0kb upstream 7232 true Chr13: 43655654-43662885 Glycine max
Glyma.13G346000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43661886-43662885 Glycine max
Glyma.13G346000 1.0kb downstream 1.0kb downstream 7232 true Chr13: 43654654-43661885 Glycine max
Glyma.13G346000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43654654-43655653 Glycine max
Glyma.13G346000 2.0kb upstream 2.0kb upstream 8232 true Chr13: 43655654-43663885 Glycine max
Glyma.13G346000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43661886-43663885 Glycine max
Glyma.13G346000 2.0kb downstream 2.0kb downstream 8232 true Chr13: 43653654-43661885 Glycine max
Glyma.13G346000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43653654-43655653 Glycine max
Glyma.13G346000 5.0kb upstream 5.0kb upstream 11232 true Chr13: 43655654-43666885 Glycine max
Glyma.13G346000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43661886-43666885 Glycine max
Glyma.13G346000 5.0kb downstream 5.0kb downstream 11232 true Chr13: 43650654-43661885 Glycine max
Glyma.13G346000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43650654-43655653 Glycine max
Glyma.13G346000 10.0kb upstream 10.0kb upstream 16232 true Chr13: 43655654-43671885 Glycine max
Glyma.13G346000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43661886-43671885 Glycine max
Glyma.13G346000 10.0kb downstream 10.0kb downstream 16232 true Chr13: 43645654-43661885 Glycine max
Glyma.13G346000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43645654-43655653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041164 5273 Angiosperm View MSA
122303866 5265 Fabidae View MSA
124073841 5270 Rosid View MSA
123747001 5271 Pentapetalae View MSA
122788149 5272 Eudicot View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1634 0.0 35.8016   High
cufflinks 5.20529 0.0 15.5758   Low
cufflinks 11.6449 0.0 31.909   High
cufflinks 7.52619 0.0 21.467    
cufflinks 8.13793 0.0 23.0629    
cufflinks 9.56353 0.0 26.6465    
cufflinks 8.07135 0.0 22.931    
cufflinks 8.84301 0.0 24.7795    
cufflinks 8.44204 0.0 23.7887    
cufflinks 1.74       Low
cufflinks 4.027       High
cufflinks 2.265        
cufflinks 1.928        
cufflinks 1.541       Low
cufflinks 3.578       High
cufflinks 2.352        
cufflinks 2.989        
cufflinks 2.057        
cufflinks 1.254       Low
cufflinks 2.636        
cufflinks 3.033        
cufflinks 2.605        
cufflinks 2.455        
cufflinks 4.213       High
cufflinks 2.269        
cufflinks 2.662        

0 Strain