Gene : Glyma.14G014900 G. max Wm82.a2.v1
Defline:  (1 of 52) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  149
Name:  ? Glyma.14G014900 Secondary Identifier:  ? PAC:30532585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G014900 0.5kb upstream 0.5kb upstream 3072 true Chr14: 1077272-1080343 Glycine max
Glyma.14G014900 0.5kb upstream 0.5kb upstream 500 false Chr14: 1077272-1077771 Glycine max
Glyma.14G014900 0.5kb downstream 0.5kb downstream 3072 true Chr14: 1077772-1080843 Glycine max
Glyma.14G014900 0.5kb downstream 0.5kb downstream 500 false Chr14: 1080344-1080843 Glycine max
Glyma.14G014900 1.0kb upstream 1.0kb upstream 3572 true Chr14: 1076772-1080343 Glycine max
Glyma.14G014900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1076772-1077771 Glycine max
Glyma.14G014900 1.0kb downstream 1.0kb downstream 3572 true Chr14: 1077772-1081343 Glycine max
Glyma.14G014900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1080344-1081343 Glycine max
Glyma.14G014900 2.0kb upstream 2.0kb upstream 4572 true Chr14: 1075772-1080343 Glycine max
Glyma.14G014900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1075772-1077771 Glycine max
Glyma.14G014900 2.0kb downstream 2.0kb downstream 4572 true Chr14: 1077772-1082343 Glycine max
Glyma.14G014900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1080344-1082343 Glycine max
Glyma.14G014900 5.0kb upstream 5.0kb upstream 7572 true Chr14: 1072772-1080343 Glycine max
Glyma.14G014900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1072772-1077771 Glycine max
Glyma.14G014900 5.0kb downstream 5.0kb downstream 7572 true Chr14: 1077772-1085343 Glycine max
Glyma.14G014900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1080344-1085343 Glycine max
Glyma.14G014900 10.0kb upstream 10.0kb upstream 12572 true Chr14: 1067772-1080343 Glycine max
Glyma.14G014900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1067772-1077771 Glycine max
Glyma.14G014900 10.0kb downstream 10.0kb downstream 12572 true Chr14: 1077772-1090343 Glycine max
Glyma.14G014900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1080344-1090343 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246449 5265 Fabidae Singleton cluster - no MSA
124051635 5270 Rosid View MSA
123620241 5271 Pentapetalae View MSA
122654654 5272 Eudicot View MSA
122042185 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.847559 0.0 2.95984   High
cufflinks 0.431596 0.0 1.5792    
cufflinks 0.204857 0.0 0.775689 Low Low
cufflinks 0.318721 0.0 1.18442    
cufflinks 0.276731 0.0 1.03713    
cufflinks 0.205396 0.0 0.77961 Low Low
cufflinks 0.547639 0.0 1.97682    
cufflinks 0.311073 0.0 1.15789    
cufflinks 0.407624 0.0 1.49705    
cufflinks 0.636        
cufflinks 0.398       Low
cufflinks 0.823       High
cufflinks 0.508        
cufflinks 0.702        
cufflinks 0.681        
cufflinks 0.596        
cufflinks 0.529        
cufflinks 0.714        
cufflinks 0.794       High
cufflinks 0.592        
cufflinks 0.421       Low
cufflinks 0.632        
cufflinks 0.903       High
cufflinks 0.382       Low
cufflinks 0.684        
cufflinks 0.446       Low

0 Strain