Gene : Glyma.14G003200 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  32
Name:  ? Glyma.14G003200 Secondary Identifier:  ? PAC:30534280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  
Gmax HEME-BIOSYNTHESIS-II Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G003200 0.5kb upstream 0.5kb upstream 4367 true Chr14: 306245-310611 Glycine max
Glyma.14G003200 0.5kb upstream 0.5kb upstream 500 false Chr14: 310112-310611 Glycine max
Glyma.14G003200 0.5kb downstream 0.5kb downstream 4367 true Chr14: 305745-310111 Glycine max
Glyma.14G003200 0.5kb downstream 0.5kb downstream 500 false Chr14: 305745-306244 Glycine max
Glyma.14G003200 1.0kb upstream 1.0kb upstream 4867 true Chr14: 306245-311111 Glycine max
Glyma.14G003200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 310112-311111 Glycine max
Glyma.14G003200 1.0kb downstream 1.0kb downstream 4867 true Chr14: 305245-310111 Glycine max
Glyma.14G003200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 305245-306244 Glycine max
Glyma.14G003200 2.0kb upstream 2.0kb upstream 5867 true Chr14: 306245-312111 Glycine max
Glyma.14G003200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 310112-312111 Glycine max
Glyma.14G003200 2.0kb downstream 2.0kb downstream 5867 true Chr14: 304245-310111 Glycine max
Glyma.14G003200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 304245-306244 Glycine max
Glyma.14G003200 5.0kb upstream 5.0kb upstream 8867 true Chr14: 306245-315111 Glycine max
Glyma.14G003200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 310112-315111 Glycine max
Glyma.14G003200 5.0kb downstream 5.0kb downstream 8867 true Chr14: 301245-310111 Glycine max
Glyma.14G003200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 301245-306244 Glycine max
Glyma.14G003200 10.0kb upstream 10.0kb upstream 13867 true Chr14: 306245-320111 Glycine max
Glyma.14G003200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 310112-320111 Glycine max
Glyma.14G003200 10.0kb downstream 10.0kb downstream 13867 true Chr14: 296245-310111 Glycine max
Glyma.14G003200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 296245-306244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308564 5265 Fabidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.0699 0.0 287.502 High  
cufflinks 67.8901 0.0 242.444 High  
cufflinks 25.0027 0.0 75.1144 High  
cufflinks 39.6652 0.0 125.752 High  
cufflinks 108.847 0.0 362.567 High High
cufflinks 22.8735 0.0 68.4872 High Low
cufflinks 27.6875 0.0 83.971 High  
cufflinks 33.0586 0.0 102.043 High  
cufflinks 178.744 0.0 951.586 High High
cufflinks 9.082     High  
cufflinks 61.134     High High
cufflinks 5.801       Low
cufflinks 3.137       Low
cufflinks 4.784       Low
cufflinks 89.13     High High
cufflinks 27.202     High  
cufflinks 10.255     High  
cufflinks 6.877       Low
cufflinks 12.619     High  
cufflinks 28.867     High  
cufflinks 68.797     High High
cufflinks 25.652     High  
cufflinks 19.501     High  
cufflinks 36.913     High  
cufflinks 26.013     High  
cufflinks 31.531     High  

0 Strain