Gene : Glyma.14G003400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21649:SF14 - PSI TYPE III CHLOROPHYLL A/B-BINDING PROTEIN Genomic Order:  34
Name:  ? Glyma.14G003400 Secondary Identifier:  ? PAC:30532779
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G003400 0.5kb upstream 0.5kb upstream 2211 true Chr14: 316998-319208 Glycine max
Glyma.14G003400 0.5kb upstream 0.5kb upstream 500 false Chr14: 316998-317497 Glycine max
Glyma.14G003400 0.5kb downstream 0.5kb downstream 2211 true Chr14: 317498-319708 Glycine max
Glyma.14G003400 0.5kb downstream 0.5kb downstream 500 false Chr14: 319209-319708 Glycine max
Glyma.14G003400 1.0kb upstream 1.0kb upstream 2711 true Chr14: 316498-319208 Glycine max
Glyma.14G003400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 316498-317497 Glycine max
Glyma.14G003400 1.0kb downstream 1.0kb downstream 2711 true Chr14: 317498-320208 Glycine max
Glyma.14G003400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 319209-320208 Glycine max
Glyma.14G003400 2.0kb upstream 2.0kb upstream 3711 true Chr14: 315498-319208 Glycine max
Glyma.14G003400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 315498-317497 Glycine max
Glyma.14G003400 2.0kb downstream 2.0kb downstream 3711 true Chr14: 317498-321208 Glycine max
Glyma.14G003400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 319209-321208 Glycine max
Glyma.14G003400 5.0kb upstream 5.0kb upstream 6711 true Chr14: 312498-319208 Glycine max
Glyma.14G003400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 312498-317497 Glycine max
Glyma.14G003400 5.0kb downstream 5.0kb downstream 6711 true Chr14: 317498-324208 Glycine max
Glyma.14G003400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 319209-324208 Glycine max
Glyma.14G003400 10.0kb upstream 10.0kb upstream 11711 true Chr14: 307498-319208 Glycine max
Glyma.14G003400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 307498-317497 Glycine max
Glyma.14G003400 10.0kb downstream 10.0kb downstream 11711 true Chr14: 317498-329208 Glycine max
Glyma.14G003400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 319209-329208 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040894 5273 Angiosperm View MSA
122308830 5265 Fabidae View MSA
124067317 5270 Rosid View MSA
123739119 5271 Pentapetalae View MSA
122792428 5272 Eudicot View MSA
121345574 5274 Embryophyte View MSA
123424103 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 512.694 0.0 2268.75 High High
cufflinks 328.138 0.0 1253.53 High  
cufflinks 148.527 0.0 471.638 High  
cufflinks 168.759 0.0 548.989 High  
cufflinks 17.6271 0.0 47.2956   Low
cufflinks 19.1419 0.0 51.2358   Low
cufflinks 154.503 0.0 494.723 High  
cufflinks 134.602 0.0 421.604 High  
cufflinks 7.1527 0.0 20.5829   Low
cufflinks 161.329     High  
cufflinks 0.916        
cufflinks 128.857     High  
cufflinks 0.088     Low Low
cufflinks 0.15       Low
cufflinks 0.666        
cufflinks 562.203     High High
cufflinks 0.038     Low Low
cufflinks 122.633     High  
cufflinks 219.949     High  
cufflinks 630.781     High High
cufflinks 0.526        
cufflinks 643.303     High High
cufflinks 477.517     High  
cufflinks 0.722        
cufflinks 668.252     High High
cufflinks 0.104       Low

0 Strain