Gene : Glyma.14G004400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11097:SF8 - EXOSOME COMPLEX COMPONENT RRP42 Genomic Order:  44
Name:  ? Glyma.14G004400 Secondary Identifier:  ? PAC:30531904
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G004400 0.5kb upstream 0.5kb upstream 2428 true Chr14: 371125-373552 Glycine max
Glyma.14G004400 0.5kb upstream 0.5kb upstream 500 false Chr14: 373053-373552 Glycine max
Glyma.14G004400 0.5kb downstream 0.5kb downstream 2428 true Chr14: 370625-373052 Glycine max
Glyma.14G004400 0.5kb downstream 0.5kb downstream 500 false Chr14: 370625-371124 Glycine max
Glyma.14G004400 1.0kb upstream 1.0kb upstream 2928 true Chr14: 371125-374052 Glycine max
Glyma.14G004400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 373053-374052 Glycine max
Glyma.14G004400 1.0kb downstream 1.0kb downstream 2928 true Chr14: 370125-373052 Glycine max
Glyma.14G004400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 370125-371124 Glycine max
Glyma.14G004400 2.0kb upstream 2.0kb upstream 3928 true Chr14: 371125-375052 Glycine max
Glyma.14G004400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 373053-375052 Glycine max
Glyma.14G004400 2.0kb downstream 2.0kb downstream 3928 true Chr14: 369125-373052 Glycine max
Glyma.14G004400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 369125-371124 Glycine max
Glyma.14G004400 5.0kb upstream 5.0kb upstream 6928 true Chr14: 371125-378052 Glycine max
Glyma.14G004400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 373053-378052 Glycine max
Glyma.14G004400 5.0kb downstream 5.0kb downstream 6928 true Chr14: 366125-373052 Glycine max
Glyma.14G004400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 366125-371124 Glycine max
Glyma.14G004400 10.0kb upstream 10.0kb upstream 11928 true Chr14: 371125-383052 Glycine max
Glyma.14G004400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 373053-383052 Glycine max
Glyma.14G004400 10.0kb downstream 10.0kb downstream 11928 true Chr14: 361125-373052 Glycine max
Glyma.14G004400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 361125-371124 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030443 5273 Angiosperm View MSA
122246549 5265 Fabidae Singleton cluster - no MSA
123990489 5270 Rosid Singleton cluster - no MSA
123754490 5271 Pentapetalae View MSA
122775864 5272 Eudicot View MSA
121299617 5274 Embryophyte View MSA
123428075 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46371 0.0 5.37382    
cufflinks 0.615057 0.0 2.35183    
cufflinks 4.48927 0.0 14.943   High
cufflinks 0.937071 0.0 3.51525    
cufflinks 0.891811 0.0 3.35115    
cufflinks 0.353445 0.0 1.38336   Low
cufflinks 0.63622 0.0 2.42895    
cufflinks 1.14817 0.0 4.26544    
cufflinks 0.746541 0.0 2.82849    
cufflinks 1.015        
cufflinks 0.352       Low
cufflinks 5.496       High
cufflinks 2.118        
cufflinks 3.15        
cufflinks 1.027        
cufflinks 3.054        
cufflinks 0.468       Low
cufflinks 3.615        
cufflinks 3.187        
cufflinks 2.997        
cufflinks 0.599       Low
cufflinks 3.31        
cufflinks 3.664        
cufflinks 0.526       Low
cufflinks 3.438        
cufflinks 0.457       Low

0 Strain