Gene : Glyma.14G005800 G. max Wm82.a2.v1

Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  58
Name:  ? Glyma.14G005800 Secondary Identifier:  ? PAC:30534231

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G005800 0.5kb upstream 0.5kb upstream 6584 true Chr14: 468049-474632 Glycine max
Glyma.14G005800 0.5kb upstream 0.5kb upstream 500 false Chr14: 474133-474632 Glycine max
Glyma.14G005800 0.5kb downstream 0.5kb downstream 6584 true Chr14: 467549-474132 Glycine max
Glyma.14G005800 0.5kb downstream 0.5kb downstream 500 false Chr14: 467549-468048 Glycine max
Glyma.14G005800 1.0kb upstream 1.0kb upstream 7084 true Chr14: 468049-475132 Glycine max
Glyma.14G005800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 474133-475132 Glycine max
Glyma.14G005800 1.0kb downstream 1.0kb downstream 7084 true Chr14: 467049-474132 Glycine max
Glyma.14G005800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 467049-468048 Glycine max
Glyma.14G005800 2.0kb upstream 2.0kb upstream 8084 true Chr14: 468049-476132 Glycine max
Glyma.14G005800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 474133-476132 Glycine max
Glyma.14G005800 2.0kb downstream 2.0kb downstream 8084 true Chr14: 466049-474132 Glycine max
Glyma.14G005800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 466049-468048 Glycine max
Glyma.14G005800 5.0kb upstream 5.0kb upstream 11084 true Chr14: 468049-479132 Glycine max
Glyma.14G005800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 474133-479132 Glycine max
Glyma.14G005800 5.0kb downstream 5.0kb downstream 11084 true Chr14: 463049-474132 Glycine max
Glyma.14G005800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 463049-468048 Glycine max
Glyma.14G005800 10.0kb upstream 10.0kb upstream 16084 true Chr14: 468049-484132 Glycine max
Glyma.14G005800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 474133-484132 Glycine max
Glyma.14G005800 10.0kb downstream 10.0kb downstream 16084 true Chr14: 458049-474132 Glycine max
Glyma.14G005800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 458049-468048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306692 5265 Fabidae View MSA
124062118 5270 Rosid View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4959 0.0 48.057   High
cufflinks 11.0915 0.0 46.0933    
cufflinks 9.57268 0.0 39.512    
cufflinks 9.0492 0.0 40.2879   Low
cufflinks 12.8237 0.0 57.7538   High
cufflinks 9.86035 0.0 40.6547    
cufflinks 10.6757 0.0 44.0934    
cufflinks 9.55421 0.0 39.6271    
cufflinks 11.0377 0.0 45.7802    
cufflinks 0.981        
cufflinks 0.729       Low
cufflinks 1.117        
cufflinks 1.687       High
cufflinks 1.941       High
cufflinks 0.842        
cufflinks 1.176        
cufflinks 0.723       Low
cufflinks 1.067        
cufflinks 1.395        
cufflinks 1.205        
cufflinks 0.81       Low
cufflinks 1.25        
cufflinks 1.277        
cufflinks 0.857        
cufflinks 1.222        
cufflinks 0.888        

0 Strain