Gene : Glyma.14G008200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  82
Name:  ? Glyma.14G008200 Secondary Identifier:  ? PAC:30532488
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G008200 0.5kb upstream 0.5kb upstream 10309 true Chr14: 633208-643516 Glycine max
Glyma.14G008200 0.5kb upstream 0.5kb upstream 500 false Chr14: 643017-643516 Glycine max
Glyma.14G008200 0.5kb downstream 0.5kb downstream 10309 true Chr14: 632708-643016 Glycine max
Glyma.14G008200 0.5kb downstream 0.5kb downstream 500 false Chr14: 632708-633207 Glycine max
Glyma.14G008200 1.0kb upstream 1.0kb upstream 10809 true Chr14: 633208-644016 Glycine max
Glyma.14G008200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 643017-644016 Glycine max
Glyma.14G008200 1.0kb downstream 1.0kb downstream 10809 true Chr14: 632208-643016 Glycine max
Glyma.14G008200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 632208-633207 Glycine max
Glyma.14G008200 2.0kb upstream 2.0kb upstream 11809 true Chr14: 633208-645016 Glycine max
Glyma.14G008200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 643017-645016 Glycine max
Glyma.14G008200 2.0kb downstream 2.0kb downstream 11809 true Chr14: 631208-643016 Glycine max
Glyma.14G008200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 631208-633207 Glycine max
Glyma.14G008200 5.0kb upstream 5.0kb upstream 14809 true Chr14: 633208-648016 Glycine max
Glyma.14G008200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 643017-648016 Glycine max
Glyma.14G008200 5.0kb downstream 5.0kb downstream 14809 true Chr14: 628208-643016 Glycine max
Glyma.14G008200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 628208-633207 Glycine max
Glyma.14G008200 10.0kb upstream 10.0kb upstream 19809 true Chr14: 633208-653016 Glycine max
Glyma.14G008200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 643017-653016 Glycine max
Glyma.14G008200 10.0kb downstream 10.0kb downstream 19809 true Chr14: 623208-643016 Glycine max
Glyma.14G008200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 623208-633207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307981 5265 Fabidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.91403 0.0 22.0202    
cufflinks 6.58628 0.0 19.5339    
cufflinks 3.76632 0.0 11.6241   Low
cufflinks 6.00584 0.0 17.9102    
cufflinks 5.68172 0.0 16.8852    
cufflinks 3.8741 0.0 11.8854   Low
cufflinks 7.14216 0.0 21.1583   High
cufflinks 4.50808 0.0 17.127    
cufflinks 5.36977 0.0 16.109    
cufflinks 1.288        
cufflinks 0.532       Low
cufflinks 1.756        
cufflinks 1.832        
cufflinks 2.282       High
cufflinks 0.769        
cufflinks 1.433        
cufflinks 0.667       Low
cufflinks 1.76        
cufflinks 2.529       High
cufflinks 0.985        
cufflinks 0.73       Low
cufflinks 1.235        
cufflinks 1.485        
cufflinks 0.679       Low
cufflinks 1.026        
cufflinks 0.964        

0 Strain