Gene : Glyma.13G371500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Genomic Order:  3715
Name:  ? Glyma.13G371500 Secondary Identifier:  ? PAC:30501617
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G371500 0.5kb upstream 0.5kb upstream 2573 true Chr13: 45665835-45668407 Glycine max
Glyma.13G371500 0.5kb upstream 0.5kb upstream 500 false Chr13: 45667908-45668407 Glycine max
Glyma.13G371500 0.5kb downstream 0.5kb downstream 2573 true Chr13: 45665335-45667907 Glycine max
Glyma.13G371500 0.5kb downstream 0.5kb downstream 500 false Chr13: 45665335-45665834 Glycine max
Glyma.13G371500 1.0kb upstream 1.0kb upstream 3073 true Chr13: 45665835-45668907 Glycine max
Glyma.13G371500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45667908-45668907 Glycine max
Glyma.13G371500 1.0kb downstream 1.0kb downstream 3073 true Chr13: 45664835-45667907 Glycine max
Glyma.13G371500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45664835-45665834 Glycine max
Glyma.13G371500 2.0kb upstream 2.0kb upstream 4073 true Chr13: 45665835-45669907 Glycine max
Glyma.13G371500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45667908-45669907 Glycine max
Glyma.13G371500 2.0kb downstream 2.0kb downstream 4073 true Chr13: 45663835-45667907 Glycine max
Glyma.13G371500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45663835-45665834 Glycine max
Glyma.13G371500 5.0kb upstream 5.0kb upstream 7073 true Chr13: 45665835-45672907 Glycine max
Glyma.13G371500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45667908-45672907 Glycine max
Glyma.13G371500 5.0kb downstream 5.0kb downstream 7073 true Chr13: 45660835-45667907 Glycine max
Glyma.13G371500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45660835-45665834 Glycine max
Glyma.13G371500 10.0kb upstream 10.0kb upstream 12073 true Chr13: 45665835-45677907 Glycine max
Glyma.13G371500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45667908-45677907 Glycine max
Glyma.13G371500 10.0kb downstream 10.0kb downstream 12073 true Chr13: 45655835-45667907 Glycine max
Glyma.13G371500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45655835-45665834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304088 5265 Fabidae View MSA
124063219 5270 Rosid View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.121757 0.0 0.480316 Low Low
cufflinks 10.4012 0.0 28.3113   High
cufflinks 0.727554 0.0 2.64316    
cufflinks 2.69479 0.0 8.58513    
cufflinks 3.14533 0.0 9.82936    
cufflinks 2.03944 0.0 6.76254    
cufflinks 2.85666 0.0 9.06144    
cufflinks 1.84149 0.0 6.17446    
cufflinks 2.81864 0.0 8.93579    
cufflinks 2.756        
cufflinks 0.159       Low
cufflinks 2.906        
cufflinks 2.843        
cufflinks 3.718        
cufflinks 0.046     Low Low
cufflinks 8.672     High  
cufflinks 0.391        
cufflinks 2.027        
cufflinks 10.773     High High
cufflinks 7.823     High  
cufflinks 0.223       Low
cufflinks 9.022     High  
cufflinks 12.457     High High
cufflinks 0.119       Low
cufflinks 6.949     High  
cufflinks 0.527        

0 Strain