Gene : Glyma.13G372300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31288:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  3723
Name:  ? Glyma.13G372300 Secondary Identifier:  ? PAC:30501292
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G372300 0.5kb upstream 0.5kb upstream 3599 true Chr13: 45736924-45740522 Glycine max
Glyma.13G372300 0.5kb upstream 0.5kb upstream 500 false Chr13: 45736924-45737423 Glycine max
Glyma.13G372300 0.5kb downstream 0.5kb downstream 3599 true Chr13: 45737424-45741022 Glycine max
Glyma.13G372300 0.5kb downstream 0.5kb downstream 500 false Chr13: 45740523-45741022 Glycine max
Glyma.13G372300 1.0kb upstream 1.0kb upstream 4099 true Chr13: 45736424-45740522 Glycine max
Glyma.13G372300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45736424-45737423 Glycine max
Glyma.13G372300 1.0kb downstream 1.0kb downstream 4099 true Chr13: 45737424-45741522 Glycine max
Glyma.13G372300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45740523-45741522 Glycine max
Glyma.13G372300 2.0kb upstream 2.0kb upstream 5099 true Chr13: 45735424-45740522 Glycine max
Glyma.13G372300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45735424-45737423 Glycine max
Glyma.13G372300 2.0kb downstream 2.0kb downstream 5099 true Chr13: 45737424-45742522 Glycine max
Glyma.13G372300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45740523-45742522 Glycine max
Glyma.13G372300 5.0kb upstream 5.0kb upstream 8099 true Chr13: 45732424-45740522 Glycine max
Glyma.13G372300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45732424-45737423 Glycine max
Glyma.13G372300 5.0kb downstream 5.0kb downstream 8099 true Chr13: 45737424-45745522 Glycine max
Glyma.13G372300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45740523-45745522 Glycine max
Glyma.13G372300 10.0kb upstream 10.0kb upstream 13099 true Chr13: 45727424-45740522 Glycine max
Glyma.13G372300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45727424-45737423 Glycine max
Glyma.13G372300 10.0kb downstream 10.0kb downstream 13099 true Chr13: 45737424-45750522 Glycine max
Glyma.13G372300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45740523-45750522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122255270 5265 Fabidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58045 0.0 25.1764    
cufflinks 18.1799 0.0 62.1151   High
cufflinks 3.25302 0.0 13.3587   Low
cufflinks 7.8464 0.0 28.8912    
cufflinks 6.55359 0.0 25.1752    
cufflinks 9.74523 0.0 34.6538    
cufflinks 5.79877 0.0 22.9301    
cufflinks 10.5991 0.0 37.3415    
cufflinks 4.91898 0.0 17.4895    
cufflinks 3.494        
cufflinks 0.739       Low
cufflinks 1.379        
cufflinks 4.828        
cufflinks 3.888        
cufflinks 1.725        
cufflinks 6.18       High
cufflinks 0.852       Low
cufflinks 1.94        
cufflinks 8.552     High High
cufflinks 5.953       High
cufflinks 1.316        
cufflinks 5.296        
cufflinks 4.026        
cufflinks 0.653       Low
cufflinks 5.79        
cufflinks 0.974       Low

0 Strain