Gene : Glyma.13G366500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  3665
Name:  ? Glyma.13G366500 Secondary Identifier:  ? PAC:30500457
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G366500 0.5kb upstream 0.5kb upstream 5076 true Chr13: 45224419-45229494 Glycine max
Glyma.13G366500 0.5kb upstream 0.5kb upstream 500 false Chr13: 45224419-45224918 Glycine max
Glyma.13G366500 0.5kb downstream 0.5kb downstream 5076 true Chr13: 45224919-45229994 Glycine max
Glyma.13G366500 0.5kb downstream 0.5kb downstream 500 false Chr13: 45229495-45229994 Glycine max
Glyma.13G366500 1.0kb upstream 1.0kb upstream 5576 true Chr13: 45223919-45229494 Glycine max
Glyma.13G366500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45223919-45224918 Glycine max
Glyma.13G366500 1.0kb downstream 1.0kb downstream 5576 true Chr13: 45224919-45230494 Glycine max
Glyma.13G366500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45229495-45230494 Glycine max
Glyma.13G366500 2.0kb upstream 2.0kb upstream 6576 true Chr13: 45222919-45229494 Glycine max
Glyma.13G366500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45222919-45224918 Glycine max
Glyma.13G366500 2.0kb downstream 2.0kb downstream 6576 true Chr13: 45224919-45231494 Glycine max
Glyma.13G366500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45229495-45231494 Glycine max
Glyma.13G366500 5.0kb upstream 5.0kb upstream 9576 true Chr13: 45219919-45229494 Glycine max
Glyma.13G366500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45219919-45224918 Glycine max
Glyma.13G366500 5.0kb downstream 5.0kb downstream 9576 true Chr13: 45224919-45234494 Glycine max
Glyma.13G366500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45229495-45234494 Glycine max
Glyma.13G366500 10.0kb upstream 10.0kb upstream 14576 true Chr13: 45214919-45229494 Glycine max
Glyma.13G366500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45214919-45224918 Glycine max
Glyma.13G366500 10.0kb downstream 10.0kb downstream 14576 true Chr13: 45224919-45239494 Glycine max
Glyma.13G366500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45229495-45239494 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253657 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4383 0.0 35.8525    
cufflinks 12.6708 0.0 33.8067    
cufflinks 10.9621 0.0 29.2926    
cufflinks 13.4188 0.0 35.8015    
cufflinks 11.4945 0.0 30.6937    
cufflinks 10.5902 0.0 28.3205    
cufflinks 26.8325 0.0 73.5008 High High
cufflinks 11.3677 0.0 30.3549    
cufflinks 12.6155 0.0 33.6597    
cufflinks 4.584       Low
cufflinks 5.537     High  
cufflinks 6.474        
cufflinks 6.758        
cufflinks 7.802     High High
cufflinks 4.26       Low
cufflinks 7.18     High  
cufflinks 3.645       Low
cufflinks 6.594        
cufflinks 6.709        
cufflinks 7.886     High High
cufflinks 5.898     High  
cufflinks 7.835     High High
cufflinks 6.03        
cufflinks 6.972     High  
cufflinks 7.385     High  
cufflinks 6.639     High  

0 Strain