Gene : Glyma.13G367400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23205 - SPLICING FACTOR 3A SUBUNIT 2 Genomic Order:  3674
Name:  ? Glyma.13G367400 Secondary Identifier:  ? PAC:30500451
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G367400 0.5kb upstream 0.5kb upstream 2782 true Chr13: 45303060-45305841 Glycine max
Glyma.13G367400 0.5kb upstream 0.5kb upstream 500 false Chr13: 45305342-45305841 Glycine max
Glyma.13G367400 0.5kb downstream 0.5kb downstream 2782 true Chr13: 45302560-45305341 Glycine max
Glyma.13G367400 0.5kb downstream 0.5kb downstream 500 false Chr13: 45302560-45303059 Glycine max
Glyma.13G367400 1.0kb upstream 1.0kb upstream 3282 true Chr13: 45303060-45306341 Glycine max
Glyma.13G367400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45305342-45306341 Glycine max
Glyma.13G367400 1.0kb downstream 1.0kb downstream 3282 true Chr13: 45302060-45305341 Glycine max
Glyma.13G367400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45302060-45303059 Glycine max
Glyma.13G367400 2.0kb upstream 2.0kb upstream 4282 true Chr13: 45303060-45307341 Glycine max
Glyma.13G367400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45305342-45307341 Glycine max
Glyma.13G367400 2.0kb downstream 2.0kb downstream 4282 true Chr13: 45301060-45305341 Glycine max
Glyma.13G367400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45301060-45303059 Glycine max
Glyma.13G367400 5.0kb upstream 5.0kb upstream 7282 true Chr13: 45303060-45310341 Glycine max
Glyma.13G367400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45305342-45310341 Glycine max
Glyma.13G367400 5.0kb downstream 5.0kb downstream 7282 true Chr13: 45298060-45305341 Glycine max
Glyma.13G367400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45298060-45303059 Glycine max
Glyma.13G367400 10.0kb upstream 10.0kb upstream 12282 true Chr13: 45303060-45315341 Glycine max
Glyma.13G367400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45305342-45315341 Glycine max
Glyma.13G367400 10.0kb downstream 10.0kb downstream 12282 true Chr13: 45293060-45305341 Glycine max
Glyma.13G367400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45293060-45303059 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300303 5265 Fabidae View MSA
124064225 5270 Rosid View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3206 0.0 48.9827    
cufflinks 16.8214 0.0 45.1076    
cufflinks 19.4669 0.0 52.0453    
cufflinks 16.4732 0.0 44.1852    
cufflinks 25.1296 0.0 67.1218 High High
cufflinks 8.98717 0.0 24.9838   Low
cufflinks 11.9298 0.0 32.4315   Low
cufflinks 19.066 0.0 50.933    
cufflinks 14.4575 0.0 38.9381    
cufflinks 9.847     High  
cufflinks 4.633       Low
cufflinks 8.592     High  
cufflinks 12.479     High High
cufflinks 15.732     High High
cufflinks 3.551       Low
cufflinks 10.435     High  
cufflinks 8.114     High  
cufflinks 8.473     High  
cufflinks 12.206     High High
cufflinks 8.824     High  
cufflinks 6.481     High  
cufflinks 8.943     High  
cufflinks 10.674     High  
cufflinks 5.955        
cufflinks 8.673     High  
cufflinks 8.057     High  

0 Strain