Gene : Glyma.14G040400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11046 - OLIGORIBONUCLEASE, MITOCHONDRIAL Genomic Order:  404
Name:  ? Glyma.14G040400 Secondary Identifier:  ? PAC:30532608
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G040400 0.5kb upstream 0.5kb upstream 6861 true Chr14: 3025220-3032080 Glycine max
Glyma.14G040400 0.5kb upstream 0.5kb upstream 500 false Chr14: 3031581-3032080 Glycine max
Glyma.14G040400 0.5kb downstream 0.5kb downstream 6861 true Chr14: 3024720-3031580 Glycine max
Glyma.14G040400 0.5kb downstream 0.5kb downstream 500 false Chr14: 3024720-3025219 Glycine max
Glyma.14G040400 1.0kb upstream 1.0kb upstream 7361 true Chr14: 3025220-3032580 Glycine max
Glyma.14G040400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3031581-3032580 Glycine max
Glyma.14G040400 1.0kb downstream 1.0kb downstream 7361 true Chr14: 3024220-3031580 Glycine max
Glyma.14G040400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3024220-3025219 Glycine max
Glyma.14G040400 2.0kb upstream 2.0kb upstream 8361 true Chr14: 3025220-3033580 Glycine max
Glyma.14G040400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3031581-3033580 Glycine max
Glyma.14G040400 2.0kb downstream 2.0kb downstream 8361 true Chr14: 3023220-3031580 Glycine max
Glyma.14G040400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3023220-3025219 Glycine max
Glyma.14G040400 5.0kb upstream 5.0kb upstream 11361 true Chr14: 3025220-3036580 Glycine max
Glyma.14G040400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3031581-3036580 Glycine max
Glyma.14G040400 5.0kb downstream 5.0kb downstream 11361 true Chr14: 3020220-3031580 Glycine max
Glyma.14G040400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3020220-3025219 Glycine max
Glyma.14G040400 10.0kb upstream 10.0kb upstream 16361 true Chr14: 3025220-3041580 Glycine max
Glyma.14G040400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3031581-3041580 Glycine max
Glyma.14G040400 10.0kb downstream 10.0kb downstream 16361 true Chr14: 3015220-3031580 Glycine max
Glyma.14G040400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3015220-3025219 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300743 5265 Fabidae View MSA
124062550 5270 Rosid View MSA
123741047 5271 Pentapetalae View MSA
122789604 5272 Eudicot View MSA
122046409 5273 Angiosperm View MSA
121344784 5274 Embryophyte View MSA
123423966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87972 0.0 17.8249    
cufflinks 4.87979 0.0 20.7576    
cufflinks 5.02815 0.0 21.0431    
cufflinks 4.82613 0.0 20.2949    
cufflinks 3.32538 0.0 15.9228   Low
cufflinks 6.63734 0.0 25.296   High
cufflinks 3.07797 0.0 11.422   Low
cufflinks 5.50045 0.0 22.2836    
cufflinks 4.6484 0.0 20.1603    
cufflinks 0.279       Low
cufflinks 0.519       High
cufflinks 0.493       High
cufflinks 0.374        
cufflinks 0.363        
cufflinks 0.405        
cufflinks 0.268       Low
cufflinks 0.287       Low
cufflinks 0.446        
cufflinks 0.566       High
cufflinks 0.273       Low
cufflinks 0.412        
cufflinks 0.321        
cufflinks 0.36        
cufflinks 0.556       High
cufflinks 0.309        
cufflinks 0.416        

0 Strain