Gene : Glyma.14G041700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  417
Name:  ? Glyma.14G041700 Secondary Identifier:  ? PAC:30533031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G041700 0.5kb upstream 0.5kb upstream 3059 true Chr14: 3149591-3152649 Glycine max
Glyma.14G041700 0.5kb upstream 0.5kb upstream 500 false Chr14: 3149591-3150090 Glycine max
Glyma.14G041700 0.5kb downstream 0.5kb downstream 3059 true Chr14: 3150091-3153149 Glycine max
Glyma.14G041700 0.5kb downstream 0.5kb downstream 500 false Chr14: 3152650-3153149 Glycine max
Glyma.14G041700 1.0kb upstream 1.0kb upstream 3559 true Chr14: 3149091-3152649 Glycine max
Glyma.14G041700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3149091-3150090 Glycine max
Glyma.14G041700 1.0kb downstream 1.0kb downstream 3559 true Chr14: 3150091-3153649 Glycine max
Glyma.14G041700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3152650-3153649 Glycine max
Glyma.14G041700 2.0kb upstream 2.0kb upstream 4559 true Chr14: 3148091-3152649 Glycine max
Glyma.14G041700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3148091-3150090 Glycine max
Glyma.14G041700 2.0kb downstream 2.0kb downstream 4559 true Chr14: 3150091-3154649 Glycine max
Glyma.14G041700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3152650-3154649 Glycine max
Glyma.14G041700 5.0kb upstream 5.0kb upstream 7559 true Chr14: 3145091-3152649 Glycine max
Glyma.14G041700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3145091-3150090 Glycine max
Glyma.14G041700 5.0kb downstream 5.0kb downstream 7559 true Chr14: 3150091-3157649 Glycine max
Glyma.14G041700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3152650-3157649 Glycine max
Glyma.14G041700 10.0kb upstream 10.0kb upstream 12559 true Chr14: 3140091-3152649 Glycine max
Glyma.14G041700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3140091-3150090 Glycine max
Glyma.14G041700 10.0kb downstream 10.0kb downstream 12559 true Chr14: 3150091-3162649 Glycine max
Glyma.14G041700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3152650-3162649 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299049 5265 Fabidae View MSA
124061418 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5665 0.0 55.115    
cufflinks 2.92117 0.0 9.72057   Low
cufflinks 18.5192 0.0 50.0375    
cufflinks 3.52679 0.0 11.4576   Low
cufflinks 11.2831 0.0 31.1897    
cufflinks 31.798 0.0 84.93 High High
cufflinks 4.47451 0.0 13.9421    
cufflinks 8.93994 0.0 25.5335    
cufflinks 8.31513 0.0 23.8328    
cufflinks 31.299     High  
cufflinks 38.581     High  
cufflinks 28.384     High  
cufflinks 10.969     High  
cufflinks 2.024       Low
cufflinks 46.19     High  
cufflinks 22.071     High  
cufflinks 135.85     High High
cufflinks 21.954     High  
cufflinks 1.809       Low
cufflinks 10.16     High  
cufflinks 21.419     High  
cufflinks 9.278     High  
cufflinks 5.553        
cufflinks 32.198     High  
cufflinks 4.098       Low
cufflinks 46.39     High  

0 Strain